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04302015_35_scaffold_405

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_35_scaffold_405_1
unknown

Not on your lists

118..504
DNA (387bp) protein (129aa)

This feature has no annotations

04302015_35_scaffold_405_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

595..1926
DNA (1332bp) protein (444aa)
Heavy metal resistance protein CzcC id=4825626 bin=GWC2_Nitrospirae_57_13 species=Mariprofundus ferrooxydans genus=Mariprofundus taxon_order=Mariprofundales taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
outer membrane efflux protein; K15725 cobalt-zinc-cadmium resistance protein CzcC
Tax=RBG_16_Gamma2_65_34_curated
04302015_35_scaffold_405_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1923..5018
DNA (3096bp) protein (1032aa)
Heavy metal efflux pump CzcA id=4825627 bin=GWC2_Nitrospirae_57_13 species=Mariprofundus ferrooxydans genus=Mariprofundus taxon_order=Mariprofundales taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
CzcA family heavy metal efflux pump
Tax=RBG_16_Gamma2_65_34_curated
04302015_35_scaffold_405_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5015..5323
DNA (309bp) protein (103aa)
Putative uncharacterized protein id=4825628 bin=GWC2_Nitrospirae_57_13 species=Mariprofundus ferrooxydans genus=Mariprofundus taxon_order=Mariprofundales taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
Tax=RBG_16_Gamma2_65_34_curated
04302015_35_scaffold_405_5
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5320..7212
DNA (1893bp) protein (631aa)
cadmium transporting P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Heavy metal translocating P-type ATPase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK06_9BURK
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EHR70978.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
04302015_35_scaffold_405_6

Not on your lists

7381..7788
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CTK1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD89011.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
04302015_35_scaffold_405_7

Not on your lists

7859..8659
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2C874_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD89010.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein rbh
04302015_35_scaffold_405_8
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8819..9172
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DQN6_9BACT
hypothetical protein
Tax=RBG_16_Gallionellales_57_15_curated
04302015_35_scaffold_405_9

Not on your lists

9432..10466
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D649_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD89013.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein rbh
04302015_35_scaffold_405_10
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10739..11422
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VX63_POLNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM40241.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
04302015_35_scaffold_405_11
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12218..13351
DNA (1134bp) protein (378aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YLM0_9BRAD
Putative uncharacterized protein {ECO:0000313|EMBL:EHR03025.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
04302015_35_scaffold_405_12
Methylotenera mobilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13608..15323
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) RepID=C6WY11_METML rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACT48810.1}; TaxID=583345 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540).;"
04302015_35_scaffold_405_13
unknown

Not on your lists

15629..15763
DNA (135bp) protein (45aa)

This feature has no annotations

04302015_35_scaffold_405_14
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15933..16544
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJM8_ACCPU rbh
Uncharacterized protein {ECO:0000313|EMBL:EXI76142.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
hypothetical protein rbh
04302015_35_scaffold_405_15
unknown

Not on your lists

comp(16895..17089)
DNA (195bp) protein (65aa)

This feature has no annotations

04302015_35_scaffold_405_16
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17256..17771)
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WMJ5_9BURK
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_47_9_curated
04302015_35_scaffold_405_trna_1
unknown

Not on your lists

18176..18248
DNA (73bp)
transferRNA
04302015_35_scaffold_405_trna_2
unknown

Not on your lists

18312..18382
DNA (71bp)
transferRNA
04302015_35_scaffold_405_17
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18881..19258
DNA (378bp) protein (126aa)
Succinate dehydrogenase, cytochrome b556 subunit n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSY4_SIDLE
succinate dehydrogenase, cytochrome b556 subunit; K00241 succinate dehydrogenase cytochrome b556 subunit
Tax=RBG_16_Gallionellales_57_15_curated
04302015_35_scaffold_405_18
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19252..19599
DNA (348bp) protein (116aa)
Succinate dehydrogenase, hydrophobic membrane anchor protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSY3_SIDLE
succinate dehydrogenase, hydrophobic membrane anchor protein; K00242 succinate dehydrogenase membrane anchor subunit
Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
04302015_35_scaffold_405_19
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19883..21337
DNA (1455bp) protein (485aa)
succinate dehydrogenase or fumarate reductase, flavoprotein subunit; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] rbh
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSY2_SIDLE rbh
04302015_35_scaffold_405_20
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21407..21811
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QK03_DESB2
hypothetical protein
Tax=GWA2_Gallionellales_59_43_curated
04302015_35_scaffold_405_21
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21832..22527
DNA (696bp) protein (232aa)
succinate dehydrogenase and fumarate reductase iron-sulfur protein (EC:1.3.5.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] rbh
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSY1_SIDLE rbh
04302015_35_scaffold_405_22
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22524..22766
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SFR4_GALCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL55361.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea; capsiferriformans (strain ES-2)).;"
04302015_35_scaffold_405_23
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22802..24088
DNA (1287bp) protein (429aa)
citrate synthase I (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] rbh
Citrate synthase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSX9_SIDLE rbh
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
04302015_35_scaffold_405_24
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24213..27077
DNA (2865bp) protein (955aa)
2-oxoglutarate dehydrogenase E1 component {ECO:0000313|EMBL:GAO32019.1}; EC=1.2.4.2 {ECO:0000313|EMBL:GAO32019.1};; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
2-oxoglutarate dehydrogenase, E1 subunit (EC:1.2.4.2); K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] rbh
2-oxoglutarate dehydrogenase, E1 subunit n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSX8_SIDLE rbh
04302015_35_scaffold_405_25
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27067..28233
DNA (1167bp) protein (389aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex {ECO:0000256|RuleBase:RU361138}; EC=2.3.1.61 {ECO:0000256|RuleBase:RU361138};; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] rbh
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSX7_SIDLE rbh
04302015_35_scaffold_405_26
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28246..29664
DNA (1419bp) protein (473aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] rbh
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Dihydrolipoyl dehydrogenase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAR3_NITMU rbh
04302015_35_scaffold_405_27
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29671..30660
DNA (990bp) protein (330aa)
Quinone oxidoreductase, YhdH/YhfP family id=2182375 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small rbh
quinone oxidoreductase, YhdH/YhfP family rbh
Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
04302015_35_scaffold_405_trna_3
unknown

Not on your lists

30714..30795
DNA (82bp)
transferRNA
Displaying items 1-30 of 35 in total

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