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04302015_35_scaffold_460

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_35_scaffold_460_1
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..411)
DNA (411bp) protein (137aa)
3-oxoacyl-(Acyl-carrier-protein) synthase, KASII n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VYP3_9BURK
3-oxoacyl-(Acyl-carrier-protein) synthase, KASII {ECO:0000313|EMBL:EGF32262.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II
04302015_35_scaffold_460_2
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(411..1070)
DNA (660bp) protein (220aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
3-oxoacyl-(Acyl-carrier-protein) synthase, KASII n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VYP3_9BURK
3-oxoacyl-(Acyl-carrier-protein) synthase, KASII {ECO:0000313|EMBL:EGF32262.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
04302015_35_scaffold_460_3
unknown

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comp(1063..1317)
DNA (255bp) protein (85aa)

This feature has no annotations

04302015_35_scaffold_460_4
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1292..2149)
DNA (858bp) protein (286aa)
Carboxylesterase {ECO:0000313|EMBL:GAO34138.1}; EC=3.1.1.1 {ECO:0000313|EMBL:GAO34138.1};; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
alpha/beta hydrolase fold protein; K03928 carboxylesterase [EC:3.1.1.1]
Alpha/beta hydrolase fold protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CM76_SIDLE
04302015_35_scaffold_460_5
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2583..2765
DNA (183bp) protein (61aa)
Tax=RBG_16_Betaproteobacteria_58_11_curated
04302015_35_scaffold_460_6
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2777..3193
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PN72_9ZZZZ
Uncharacterized conserved protein {ECO:0000313|EMBL:BAO82756.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium B1.;"
hypothetical protein
04302015_35_scaffold_460_7
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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3287..5167
DNA (1881bp) protein (627aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NWK7_AROAE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAI10557.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
04302015_35_scaffold_460_8
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5148..5855
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. H160 RepID=B5WH78_9BURK
Uncharacterized protein {ECO:0000313|EMBL:BAP88347.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
04302015_35_scaffold_460_9
blood disease bacterium R229, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5755..6192)
DNA (438bp) protein (146aa)
integrase n=1 Tax=Bordetella sp. FB-8 RepID=UPI00035DB3D3
Putative phage integrase {ECO:0000313|EMBL:CCA82254.1}; TaxID=741978 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="blood disease bacterium R229.;"
phage-related integrase
04302015_35_scaffold_460_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6549..8135)
DNA (1587bp) protein (529aa)
guaA; GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] rbh
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYE0_HALNC rbh
04302015_35_scaffold_460_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8219..9679)
DNA (1461bp) protein (487aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] rbh
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain AT
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYD9_HALNC rbh
04302015_35_scaffold_460_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9825..10148
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYD8_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95461.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
04302015_35_scaffold_460_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10221..10529)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYA0_HALNC
hypothetical protein; K09131 hypothetical protein
UPF0235 protein Hneap_0569 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
04302015_35_scaffold_460_14
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10551..12485)
DNA (1935bp) protein (645aa)
ABC transporter related protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY99_HALNC rbh
ABC transporter; K15738 ATP-binding cassette, subfamily F, uup rbh
ABC transporter related protein {ECO:0000313|EMBL:ACX95422.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
04302015_35_scaffold_460_15
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12575..14086
DNA (1512bp) protein (504aa)
Redoxin domain protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY98_HALNC rbh
redoxin rbh
Redoxin domain protein {ECO:0000313|EMBL:ACX95421.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
04302015_35_scaffold_460_16
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14053..15264
DNA (1212bp) protein (404aa)
Uncharacterized conserved protein UCP015557 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY97_HALNC rbh
hypothetical protein rbh
Uncharacterized conserved protein UCP015557 {ECO:0000313|EMBL:ACX95420.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
04302015_35_scaffold_460_17
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15327..15890
DNA (564bp) protein (188aa)
Elongation factor P n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY96_HALNC rbh
translation elongation factor P; K02356 elongation factor P rbh
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
04302015_35_scaffold_460_18
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16019..17053
DNA (1035bp) protein (345aa)
Diguanylate cyclase with GAF sensor n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY95_HALNC rbh
GAF sensor-containing diguanylate cyclase rbh
Diguanylate cyclase with GAF sensor {ECO:0000313|EMBL:ACX95418.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
04302015_35_scaffold_460_19
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17236..18288
DNA (1053bp) protein (351aa)
exodeoxyribonuclease V subunit gamma (EC:3.1.11.5); K03583 exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Exodeoxyribonuclease V, gamma subunit n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY94_HALNC
Displaying 19 items

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