ggKbase home page

04302015_35_scaffold_680

Search features with annotation key words

Displaying 15 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_35_scaffold_680_1
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51..833)
DNA (783bp) protein (261aa)
exodeoxyribonuclease III Xth (EC:3.1.11.2); K01142 exodeoxyribonuclease III [EC:3.1.11.2] rbh
Exodeoxyribonuclease III {ECO:0000313|EMBL:ABM38078.1}; EC=3.1.11.2 {ECO:0000313|EMBL:ABM38078.1};; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
Exodeoxyribonuclease III n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VR00_POLNA rbh
04302015_35_scaffold_680_2
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(877..1470)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J3D8S4_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL86936.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein rbh
04302015_35_scaffold_680_3
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1472..1975)
DNA (504bp) protein (168aa)
dihydrofolate reductase (EC:1.5.1.3); K00287 dihydrofolate reductase [EC:1.5.1.3]
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Dihydrofolate reductase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CI7_POLSJ
04302015_35_scaffold_680_4
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1992..2837)
DNA (846bp) protein (282aa)
thyA; thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45] rbh
Thymidylate synthase {ECO:0000255|HAMAP-Rule:MF_00008}; Short=TS {ECO:0000255|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000255|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000255|HAMAP-Rule:MF_00008};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Thymidylate synthase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=TYSY_POLSJ rbh
04302015_35_scaffold_680_5
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3474..4955)
DNA (1482bp) protein (494aa)
FAD linked oxidase-like protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CI1_POLSJ rbh
FAD linked oxidase-like protein rbh
FAD linked oxidase-like protein {ECO:0000313|EMBL:ABE43761.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_35_scaffold_680_6
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4952..5329)
DNA (378bp) protein (126aa)
Membrane protein-like protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CI0_POLSJ
hypothetical protein
Membrane protein-like protein {ECO:0000313|EMBL:ABE43762.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_35_scaffold_680_7
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5363..6589
DNA (1227bp) protein (409aa)
UPF0761 membrane protein PMI15_01267 n=1 Tax=Polaromonas sp. CF318 RepID=J2LNQ8_9BURK rbh
UPF0761 membrane protein PMI15_01267 {ECO:0000256|HAMAP-Rule:MF_00672}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
ribonuclease BN; K07058 membrane protein rbh
04302015_35_scaffold_680_8
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6771..6965
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J3D8R8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL86926.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
04302015_35_scaffold_680_9
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6974..7189
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J2L3Q8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL86925.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
04302015_35_scaffold_680_10
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7318..7743
DNA (426bp) protein (142aa)
Thioredoxin n=1 Tax=Polaromonas sp. CF318 RepID=J2LNQ5_9BURK
Thioredoxin {ECO:0000313|EMBL:EJL86923.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
04302015_35_scaffold_680_11
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7968..8774)
DNA (807bp) protein (269aa)
Alpha/beta hydrolase fold protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CH4_POLSJ rbh
alpha/beta hydrolase fold protein rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ABE43768.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_35_scaffold_680_12
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8869..10167)
DNA (1299bp) protein (433aa)
O-acetylhomoserine aminocarboxypropyltransferase (EC:2.5.1.49); K01740 O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
OAH/OAS sulfhydrylase n=1 Tax=Polaromonas sp. CF318 RepID=J3D8L3_9BURK
OAH/OAS sulfhydrylase {ECO:0000313|EMBL:EJL86919.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
04302015_35_scaffold_680_13
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10363..10830
DNA (468bp) protein (156aa)
CBS domain n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CH2_POLSJ
CBS domain-containing protein
CBS domain {ECO:0000313|EMBL:ABE43770.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_35_scaffold_680_14
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10888..11985
DNA (1098bp) protein (366aa)
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] rbh
Chorismate synthase {ECO:0000255|HAMAP-Rule:MF_00300}; Short=CS {ECO:0000255|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000255|HAMAP-Rule:MF_00300};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000255|HAMAP-Rule:MF_00300}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Chorismate synthase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=AROC_POLSJ rbh
04302015_35_scaffold_680_15
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12219..13103)
DNA (885bp) protein (295aa)
Putative permease, DMT superfamily n=1 Tax=Polaromonas sp. CF318 RepID=J3D0F3_9BURK
Putative permease, DMT superfamily {ECO:0000313|EMBL:EJL82189.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
Displaying 15 items

View Taxonomy