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04302015_37_scaffold_15

Search features with annotation key words

Displaying items 1-30 of 108 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_37_scaffold_15_1
unknown

Not on your lists

comp(80..334)
DNA (255bp) protein (85aa)

This feature has no annotations

04302015_37_scaffold_15_2
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

506..1228
DNA (723bp) protein (241aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13H10_BURXL
Crp/FNR family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ABE36629.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
04302015_37_scaffold_15_3
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1225..1566
DNA (342bp) protein (114aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Carboxymuconolactone decarboxylase family protein n=2 Tax=Acidiphilium RepID=F0IXF8_ACIMA
carboxymuconolactone decarboxylase family protein
04302015_37_scaffold_15_4
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1654..2403
DNA (750bp) protein (250aa)
Nitrogen fixation regulation protein FixK n=3 Tax=Acidiphilium RepID=F0IZ12_ACIMA
CRP/FNR family transcriptional regulator
CRP/FNR family transcriptional regulator {ECO:0000313|EMBL:EGO96601.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_37_scaffold_15_5
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2580..3617
DNA (1038bp) protein (346aa)
zinc-dependent alcohol dehydrogenase (EC:1.1.1.-)
alcohol dehydrogenase n=1 Tax=Marinobacterium rhizophilum RepID=UPI00037FA876 rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:KKC32767.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
04302015_37_scaffold_15_6
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3663..5045
DNA (1383bp) protein (461aa)
succinate-semialdehyde dehdyrogenase n=1 Tax=Methyloferula stellata RepID=UPI0003812075
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KJC56598.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
succinate-semialdehyde dehdyrogenase
04302015_37_scaffold_15_7
Marinomonas sp. MWYL1, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5091..6218
DNA (1128bp) protein (376aa)
NAD(P) transhydrogenase subunit alpha n=1 Tax=Methyloferula stellata RepID=UPI00036915E6
NAD(P) transhydrogenase subunit alpha
Alanine dehydrogenase/PNT domain protein {ECO:0000313|EMBL:ABR70894.1}; TaxID=400668 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas sp. (strain MWYL1).;"
04302015_37_scaffold_15_8
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6232..6576
DNA (345bp) protein (115aa)
putative NAD(P) transhydrogenase alpha-2 subunit (EC:1.6.1.2)
Putative NAD(P) transhydrogenase alpha-2 subunit {ECO:0000313|EMBL:ABE36425.1}; EC=1.6.1.2 {ECO:0000313|EMBL:ABE36425.1};; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
Putative NAD(P) transhydrogenase alpha-2 subunit n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13HL4_BURXL
04302015_37_scaffold_15_9
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6580..8019
DNA (1440bp) protein (480aa)
putative NAD(P) transhydrogenase beta subunit (EC:1.6.1.2) rbh
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003763B27
04302015_37_scaffold_15_10
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8043..9077
DNA (1035bp) protein (345aa)
Zn-dependent alcohol dehydrogenase n=1 Tax=Pseudomonas fluorescens R124 RepID=K0WFN8_PSEFL
Zn-dependent alcohol dehydrogenase {ECO:0000313|EMBL:EJZ58222.1}; TaxID=743713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens R124.;"
alcohol dehydrogenase GroES domain-containing protein rbh
04302015_37_scaffold_15_11
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9366..12758
DNA (3393bp) protein (1131aa)
Exported tricorn protease n=3 Tax=mine drainage metagenome RepID=T1BTI0_9ZZZZ rbh
Peptidase S41 {ECO:0000313|EMBL:KEZ76041.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
peptidase S41
04302015_37_scaffold_15_12
unknown

Not on your lists

12789..13001
DNA (213bp) protein (71aa)

This feature has no annotations

04302015_37_scaffold_15_13
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13362..14102)
DNA (741bp) protein (247aa)
Transcriptional regulator, GntR family n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G2M8_ACICJ
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABQ32110.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_15_14
unknown

Not on your lists

comp(14099..14290)
DNA (192bp) protein (64aa)

This feature has no annotations

04302015_37_scaffold_15_15
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14357..15436)
DNA (1080bp) protein (360aa)
PhnM family protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J6I6_ACIMA
PhnM family protein
PhnM family protein {ECO:0000313|EMBL:BAJ82603.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_37_scaffold_15_16
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15433..16152)
DNA (720bp) protein (240aa)
Phosphonate C-P lyase system protein PhnL n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RPZ4_9PROT
Phosphonate C-P lyase system protein PhnL {ECO:0000313|EMBL:EFH10641.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
phosphonate C-P lyase system protein PhnL
04302015_37_scaffold_15_17
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16149..16916)
DNA (768bp) protein (256aa)
PhnK n=1 Tax=Acidiphilium sp. PM RepID=F7S2Q4_9PROT
Putative phosphonates utilization ATP-binding protein PhnK {ECO:0000313|EMBL:KDM66938.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
phnK; phosphonate C-P lyase system protein PhnK
04302015_37_scaffold_15_18
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16913..17746)
DNA (834bp) protein (278aa)
Phosphonate metabolism PhnJ n=1 Tax=Acidiphilium sp. PM RepID=F7S2Q5_9PROT
PhnJ family protein
Phosphonate metabolism PhnJ {ECO:0000313|EMBL:EGO96565.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_37_scaffold_15_19
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17733..18851)
DNA (1119bp) protein (373aa)
Phosphonate metabolism n=1 Tax=Acidiphilium sp. PM RepID=F7S2Q6_9PROT rbh
PhnI family protein rbh
Phosphonate metabolism {ECO:0000313|EMBL:EGO96566.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_37_scaffold_15_20
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18853..19413)
DNA (561bp) protein (187aa)
Phosphonate metabolism n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G2M0_ACICJ
Phosphonate metabolism {ECO:0000313|EMBL:KDM66941.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
phosphonate metabolism protein
04302015_37_scaffold_15_21
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19410..19871)
DNA (462bp) protein (154aa)
PhnG family protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J6I0_ACIMA
PhnG family protein
PhnG family protein {ECO:0000313|EMBL:BAJ82597.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_37_scaffold_15_22
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19890..20603)
DNA (714bp) protein (238aa)
acetyltransferase n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F5FA9B
Phosphonate metabolim protein, transferase hexapeptide repeat family {ECO:0000313|EMBL:EHM00118.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
acetyltransferase
04302015_37_scaffold_15_23
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20600..21973)
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037C8F48 rbh
general substrate transporter rbh
General substrate transporter {ECO:0000313|EMBL:ABQ30804.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_15_24
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22179..23000)
DNA (822bp) protein (274aa)
Phosphonoacetaldehyde hydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; Short=Phosphonatase {ECO:0000256|HAMAP-Rule:MF_01375};; EC=3.11.1.1 {ECO:0000256|HAMAP-Rule:MF_01375};; Phosphonoacetaldehyde phosphonohydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
phosphonoacetaldehyde hydrolase n=1 Tax=Oceanimonas smirnovii RepID=UPI00038228D3
phosphonoacetaldehyde hydrolase
04302015_37_scaffold_15_25
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22997..23800)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037803F3
Putative 2-aminoethylphosphonate transport system permease protein PhnV {ECO:0000313|EMBL:KDM66492.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
ABC-type spermidine/putrescine transport system, permease component II
04302015_37_scaffold_15_26
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23797..24678)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036740B7
Putative 2-aminoethylphosphonate transport system permease protein PhnU {ECO:0000313|EMBL:KDM66827.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
2-aminoethylphosphonate ABC transporter permease
04302015_37_scaffold_15_27
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24675..25838)
DNA (1164bp) protein (388aa)
ABC transporter n=1 Tax=Streptomyces sp. Amel2xE9 RepID=UPI00037D9645 rbh
Putative 2-aminoethylphosphonate import ATP-binding protein PhnT {ECO:0000313|EMBL:KDM66826.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
phnT; 2-aminoethylphosphonate transporter ATP-binding protein phnT rbh
04302015_37_scaffold_15_28
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25845..26900)
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI000367AE5E rbh
Putative 2-aminoethylphosphonate-binding periplasmic protein PhnS {ECO:0000313|EMBL:KDM66825.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
2-aminoethylphosphonate ABC transporter substrate-binding protein
04302015_37_scaffold_15_29
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27119..28315
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YQ12_BRASO
phosphatase
Uncharacterized protein {ECO:0000313|EMBL:CAL75988.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
04302015_37_scaffold_15_30
Pseudomonas sp. RIT357, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28319..28897)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Pseudomonas tolaasii RepID=UPI0002EC79DB
Uncharacterized protein {ECO:0000313|EMBL:EZP67218.1}; TaxID=1470593 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. RIT357.;"
hypothetical protein
Displaying items 1-30 of 108 in total

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