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04302015_37_scaffold_28

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Displaying items 1-30 of 85 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_37_scaffold_28_1
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(646..936)
DNA (291bp) protein (97aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
CRISPR-associated protein Cas2 n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B361DA
CRISPR-associated protein Cas2
04302015_37_scaffold_28_2
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(940..1974)
DNA (1035bp) protein (345aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LX06_SYNAS
Conserved protein of unknown function. Might be involved in the DNA repair. CRISPR-associated protein, Cas1 family
04302015_37_scaffold_28_3
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1971..2606)
DNA (636bp) protein (212aa)
CRISPR-associated exonuclease, Cas4 family n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RB02_DESPD
CRISPR-associated exonuclease, Cas4 family
CRISPR-associated exonuclease, Cas4 family {ECO:0000313|EMBL:ADW17646.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
04302015_37_scaffold_28_4
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2622..3467)
DNA (846bp) protein (282aa)
CRISPR-associated protein, Csd2 family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21RK0_RHOFD rbh
CRISPR-associated Csh2 family protein rbh
CRISPR-associated protein, Csd2 family {ECO:0000313|EMBL:ABD71603.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
04302015_37_scaffold_28_5
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3464..5413)
DNA (1950bp) protein (650aa)
CRISPR-associated protein, Csd1 family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21RK1_RHOFD rbh
CRISPR-associated Csd1 family protein rbh
Tax=BJP_08E140C01_Xanthomonadales_64_42
04302015_37_scaffold_28_6

Not on your lists

comp(5415..6131)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QQE6_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CBI09467.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein rbh
04302015_37_scaffold_28_7
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(6124..8616)
DNA (2493bp) protein (831aa)
CRISPR-associated helicase, Cas3 family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21RK3_RHOFD rbh
CRISPR-associated helicase Cas3 rbh
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
04302015_37_scaffold_28_8
Acetobacter tropicalis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8964..9344)
DNA (381bp) protein (127aa)
Resolvase, N terminal domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2R4_9SPHN
Acetobacter tropicalis DNA, scaffold: scf_atr1_v1050, strain NBRC 16470, whole genome shotgun sequence {ECO:0000313|EMBL:GAL96876.1}; TaxID=104102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter tropicalis.;"
DNA resolvase
04302015_37_scaffold_28_9
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9755..10459)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=beta proteobacterium L13 RepID=UPI0003812072 rbh
alpha/beta hydrolase fold rbh
Tax=GWA2_Curvibacter_64_110_curated
04302015_37_scaffold_28_10
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10449..13409)
DNA (2961bp) protein (987aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PYX4_9RHOO rbh
Uncharacterized protein {ECO:0000313|EMBL:BAL23511.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
hypothetical protein rbh
04302015_37_scaffold_28_11
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13409..14920)
DNA (1512bp) protein (504aa)
Phage integrase n=1 Tax=Azoarcus sp. KH32C RepID=H0PYX5_9RHOO rbh
phage integrase rbh
Tax=GWA2_Curvibacter_64_110_curated
04302015_37_scaffold_28_12
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14917..17151)
DNA (2235bp) protein (745aa)
Exodeoxyribonuclease V, alpha subunit n=1 Tax=Azoarcus sp. KH32C RepID=H0PYX6_9RHOO rbh
recD; exodeoxyribonuclease V, alpha subunit rbh
Exodeoxyribonuclease V, alpha subunit {ECO:0000313|EMBL:BAL23513.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
04302015_37_scaffold_28_13
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17148..17603)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PYX7_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL23514.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
04302015_37_scaffold_28_14
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17763..18551)
DNA (789bp) protein (263aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Acidiphilium RepID=A5FWA4_ACICJ
04302015_37_scaffold_28_15
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18548..19228)
DNA (681bp) protein (227aa)
carbonic anhydrase (EC:4.2.1.1)
Carbonic anhydrase IcfA {ECO:0000313|EMBL:KDM68240.1}; EC=4.2.1.1 {ECO:0000313|EMBL:KDM68240.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
Carbonate dehydratase n=3 Tax=Acidiphilium RepID=A5FWA5_ACICJ
04302015_37_scaffold_28_16
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19267..20136)
DNA (870bp) protein (290aa)
Chemotaxis protein MotA n=2 Tax=Acidiphilium RepID=F0J0D0_ACIMA
motA; chemotaxis protein MotA
Motility protein A {ECO:0000313|EMBL:KDM68175.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_37_scaffold_28_17
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20163..21278)
DNA (1116bp) protein (372aa)
OmpA/MotB domain protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FZS0_ACICJ
OmpA/MotB domain-containing protein
Motility protein B {ECO:0000313|EMBL:KDM68174.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_37_scaffold_28_18
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21372..22808)
DNA (1437bp) protein (479aa)
Putative glycosyltransferase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J0D3_ACIMA
putative glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:BAJ81493.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_37_scaffold_28_19
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22805..23938)
DNA (1134bp) protein (378aa)
dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83)
Dolichyl-phosphate beta-D-mannosyltransferase {ECO:0000313|EMBL:ABQ31105.1}; EC=2.4.1.83 {ECO:0000313|EMBL:ABQ31105.1};; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Dolichyl-phosphate beta-D-mannosyltransferase n=2 Tax=Acidiphilium RepID=A5FZS3_ACICJ
04302015_37_scaffold_28_20
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23935..24420)
DNA (486bp) protein (162aa)
putative peroxiredoxin (EC:1.11.1.15)
Redoxin domain-containing protein {ECO:0000313|EMBL:EGO94938.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EGO94938.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
Redoxin domain-containing protein n=2 Tax=Acidiphilium RepID=F7S7D8_9PROT
04302015_37_scaffold_28_21
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24451..25251
DNA (801bp) protein (267aa)
UPF0301 protein HMPREF0731_4268 n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RT56_9PROT
UPF0301 protein Asru_0086_05 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Transcriptional regulator, algH
04302015_37_scaffold_28_22
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25268..25768)
DNA (501bp) protein (167aa)
GCN5-related N-acetyltransferase n=3 Tax=Acidiphilium RepID=A5FZR8_ACICJ
putative acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABQ31100.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_28_23
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26050..26370
DNA (321bp) protein (107aa)
Putative ABC transporter permease/ATP-binding protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J0C8_ACIMA
ABC transporter-like protein
ABC transporter-like protein {ECO:0000313|EMBL:EGO94434.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_37_scaffold_28_24
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26357..28225
DNA (1869bp) protein (623aa)
ABC transporter related protein n=2 Tax=Acidiphilium RepID=A5FZR7_ACICJ
ABC transporter-like protein
ABC transporter-like protein {ECO:0000313|EMBL:EGO94434.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_37_scaffold_28_25
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28191..29696
DNA (1506bp) protein (502aa)
Type I secretion membrane fusion protein, HlyD family n=3 Tax=Acidiphilium RepID=A5FZR6_ACICJ
HlyD family secretion protein
HlyD family type I secretion membrane fusion protein {ECO:0000313|EMBL:EGO94435.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_37_scaffold_28_26
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29734..31536
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J0C6_ACIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ81486.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_37_scaffold_28_27
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31542..34418
DNA (2877bp) protein (959aa)
Putative glycosyltransferase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J0C5_ACIMA
putative glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:BAJ81485.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_37_scaffold_28_28
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34507..35364
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J0C4_ACIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ81484.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_37_scaffold_28_29
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35381..36745
DNA (1365bp) protein (455aa)
Putative glycosyltransferase n=2 Tax=Acidiphilium RepID=F0J0C3_ACIMA
putative glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:KDM65856.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_37_scaffold_28_30
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36742..37707
DNA (966bp) protein (322aa)
Arginase/agmatinase/formimionoglutamate hydrolase n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CTG5_9BURK rbh
speB; agmatinase SpeB
Agmatinase SpeB {ECO:0000313|EMBL:AHK46634.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
Displaying items 1-30 of 85 in total

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