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04302015_37_scaffold_30

Search features with annotation key words

Displaying items 1-30 of 51 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_37_scaffold_30_1
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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113..1285
DNA (1173bp) protein (391aa)
Histidine kinase HAMP region domain protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNB4_9GAMM rbh
histidine kinase HAMP region domain-containing protein rbh
Histidine kinase HAMP region domain protein {ECO:0000313|EMBL:CDQ12205.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
04302015_37_scaffold_30_2
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1624..3084
DNA (1461bp) protein (487aa)
isocitrate dehydrogenase (EC:1.1.1.41)
Isocitrate dehydrogenase {ECO:0000313|EMBL:EGO93743.1}; EC=1.1.1.42 {ECO:0000313|EMBL:EGO93743.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
Isocitrate dehydrogenase (NAD(+)) n=2 Tax=Acidiphilium RepID=A5G047_ACICJ
04302015_37_scaffold_30_3
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3257..3487
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FQ42_PHAMO
Uncharacterized protein {ECO:0000313|EMBL:CCG40480.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
hypothetical protein
04302015_37_scaffold_30_4
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3642..4061)
DNA (420bp) protein (140aa)
Membrane protein-like protein n=2 Tax=Acidiphilium RepID=A5G046_ACICJ
hypothetical protein
Membrane protein-like protein {ECO:0000313|EMBL:ABQ31228.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_30_5
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4224..5165)
DNA (942bp) protein (314aa)
glutathione synthetase (EC:6.3.2.3)
Glutathione synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; EC=6.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00162};; GSH synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; Glutathione synthase {ECO:0000256|HAMAP-Rule:MF_00162}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Glutathione synthetase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G043_ACICJ
04302015_37_scaffold_30_6
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5208..5609)
DNA (402bp) protein (134aa)
Uncharacterized protein n=3 Tax=Acidiphilium RepID=A5G042_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ31224.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_30_7
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5643..6104)
DNA (462bp) protein (154aa)
Uncharacterized protein n=3 Tax=Acidiphilium RepID=A5G041_ACICJ
hypothetical protein
Cell shape determination CcmA {ECO:0000313|EMBL:KDM66875.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_37_scaffold_30_8
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6596..7594
DNA (999bp) protein (333aa)
Putative sugar kinase {ECO:0000313|EMBL:BAJ81614.1}; EC=2.7.1.- {ECO:0000313|EMBL:BAJ81614.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Putative sugar kinase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J0S8_ACIMA
ribokinase-like domain-containing protein
04302015_37_scaffold_30_9
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7769..7954
DNA (186bp) protein (62aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
04302015_37_scaffold_30_10
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8130..8957
DNA (828bp) protein (276aa)
SAF domain protein n=2 Tax=Acidiphilium RepID=A5G038_ACICJ
SAF domain protein {ECO:0000313|EMBL:ABQ31220.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
putative pilus assembly protein
04302015_37_scaffold_30_11
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8994..10178
DNA (1185bp) protein (395aa)
Flp pilus assembly protein ATPase CpaE-like protein n=3 Tax=Acidiphilium RepID=A5G037_ACICJ
Flp pilus assembly protein ATPase CpaE-like protein
Flp pilus assembly protein ATPase CpaE-like protein {ECO:0000313|EMBL:ABQ31219.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_30_12
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10175..11536
DNA (1362bp) protein (454aa)
Type II secretion system protein E n=3 Tax=Acidiphilium RepID=A5G036_ACICJ
type II secretion system protein E
Putative conjugal transfer protein {ECO:0000313|EMBL:KDM66880.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_37_scaffold_30_13
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11533..12477
DNA (945bp) protein (315aa)
Type II secretion system protein n=3 Tax=Acidiphilium RepID=A5G035_ACICJ
putative type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:ABQ31217.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_30_14
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12474..13394
DNA (921bp) protein (307aa)
Type II secretion system protein n=2 Tax=Acidiphilium RepID=F7SAT5_9PROT
putative type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:EGO93756.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_37_scaffold_30_15
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13363..13971)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G197_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ31629.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_30_16
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14148..15569
DNA (1422bp) protein (474aa)
Major facilitator superfamily MFS_1 n=3 Tax=Acidiphilium RepID=A5G198_ACICJ
putative major facilitator superfamily transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:KDM65428.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_37_scaffold_30_17
unknown

Not on your lists

comp(15483..15692)
DNA (210bp) protein (70aa)

This feature has no annotations

04302015_37_scaffold_30_18
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15792..16085)
DNA (294bp) protein (98aa)
SirA family protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IZF5_ACIMA
SirA family protein
SirA family protein {ECO:0000313|EMBL:BAJ81165.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_37_scaffold_30_19
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16241..16678
DNA (438bp) protein (146aa)
Transcriptional regulator n=3 Tax=Acidiphilium RepID=A5FZE1_ACICJ
MucR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ABQ30973.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_30_20

Not on your lists

comp(16682..17620)
DNA (939bp) protein (313aa)
CAAX amino terminal protease family protein n=1 Tax=mine drainage metagenome RepID=T0ZVE8_9ZZZZ
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EQD32619.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
CAAX amino terminal protease
04302015_37_scaffold_30_21
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17617..18630)
DNA (1014bp) protein (338aa)
ferredoxin--NADP reductase (EC:1.18.1.2)
Ferredoxin--NADP reductase {ECO:0000256|HAMAP-Rule:MF_01685}; Short=FNR {ECO:0000256|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000256|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000256|HAMAP-Rule:MF_01685};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
Ferredoxin--NADP reductase n=3 Tax=Acidiphilium RepID=FENR_ACICJ
04302015_37_scaffold_30_22
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18742..19200
DNA (459bp) protein (153aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=A5FYH9_ACICJ
hypothetical protein
tRNA threonylcarbamoyl adenosine modification protein YjeE {ECO:0000313|EMBL:KDM66259.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_37_scaffold_30_23
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19197..22112
DNA (2916bp) protein (972aa)
Inactivated superfamily I helicase-like protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FYI0_ACICJ
hypothetical protein
Inactivated superfamily I helicase-like protein {ECO:0000313|EMBL:ABQ30662.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_30_24
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22109..25546
DNA (3438bp) protein (1146aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
addA; double-strand break repair helicase AddA (EC:3.6.4.12)
UvrD-like DNA helicase n=1 Tax=Acidiphilium sp. PM RepID=F7S331_9PROT
04302015_37_scaffold_30_25
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25634..26680
DNA (1047bp) protein (349aa)
NAD-dependent epimerase/dehydratase family protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J1B1_ACIMA
NAD-dependent epimerase/dehydratase family protein
NAD-dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:BAJ79493.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_37_scaffold_30_26
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26688..27827
DNA (1140bp) protein (380aa)
Glycosyl transferase, family 2 n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FUR6_ACICJ
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABQ29348.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_30_27
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27827..28669
DNA (843bp) protein (281aa)
putative squalene/phytoene synthase (EC:2.5.1.-)
Putative squalene/phytoene synthase {ECO:0000313|EMBL:BAJ79491.1}; EC=2.5.1.- {ECO:0000313|EMBL:BAJ79491.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Putative squalene/phytoene synthase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J1A9_ACIMA
04302015_37_scaffold_30_28
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28666..29541
DNA (876bp) protein (292aa)
putative squalene/phytoene synthase (EC:2.5.1.-)
Putative squalene/phytoene synthase {ECO:0000313|EMBL:BAJ79490.1}; EC=2.5.1.- {ECO:0000313|EMBL:BAJ79490.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Putative squalene/phytoene synthase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J1A8_ACIMA
04302015_37_scaffold_30_29
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29538..30791
DNA (1254bp) protein (418aa)
Amine oxidase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J1A7_ACIMA
Amine oxidase {ECO:0000313|EMBL:KDM67260.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
amine oxidase
04302015_37_scaffold_30_30
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30814..31662)
DNA (849bp) protein (283aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:BAJ81619.1}; EC=3.5.1.28 {ECO:0000313|EMBL:BAJ81619.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
N-acetylmuramoyl-L-alanine amidase n=3 Tax=Acidiphilium RepID=A5G045_ACICJ
Displaying items 1-30 of 51 in total

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