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04302015_37_scaffold_139

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_37_scaffold_139_1
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..579)
DNA (579bp) protein (193aa)
Transcriptional regulator, Crp/Fnr family n=2 Tax=Acidiphilium RepID=A5G0B9_ACICJ
CRP/FNR family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ABQ31301.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_139_2
unknown

Not on your lists

comp(607..780)
DNA (174bp) protein (58aa)

This feature has no annotations

04302015_37_scaffold_139_3
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1052..2470)
DNA (1419bp) protein (473aa)
Possible peroxidase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YER5_MOBAS rbh
Uncharacterized protein {ECO:0000313|EMBL:KJC54019.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
peroxidase
04302015_37_scaffold_139_4
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2467..3228)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U0ZHW0_9NEIS
Uncharacterized protein {ECO:0000313|EMBL:KJC50375.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
04302015_37_scaffold_139_5
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3173..4192)
DNA (1020bp) protein (340aa)
Catalase-related peroxidase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YER7_MOBAS rbh
Possible catalase {ECO:0000313|EMBL:EAS48828.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
catalase domain-containing protein
04302015_37_scaffold_139_6
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4307..7066)
DNA (2760bp) protein (920aa)
Transcriptional regulatory protein (LuxR-family) n=1 Tax=Mycobacterium ulcerans (strain Agy99) RepID=A0PRT3_MYCUA
Uncharacterized protein {ECO:0000313|EMBL:KJC54094.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
LuxR family transcriptional regulator
04302015_37_scaffold_139_7
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7203..8051)
DNA (849bp) protein (283aa)
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
2-dehydro-3-deoxyphosphooctonate aldolase n=3 Tax=Acidiphilium RepID=A5FXW8_ACICJ
04302015_37_scaffold_139_8
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8048..9679)
DNA (1632bp) protein (544aa)
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
CTP synthase n=3 Tax=Acidiphilium RepID=PYRG_ACICJ
04302015_37_scaffold_139_9
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9756..10241)
DNA (486bp) protein (162aa)
Protein translocase subunit secG n=3 Tax=Acidiphilium RepID=A5FXW6_ACICJ
secG; protein translocase subunit SecG
Protein translocase subunit secG {ECO:0000313|EMBL:ABQ30448.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_139_10
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10330..11097)
DNA (768bp) protein (256aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000255|HAMAP-Rule:MF_00147}; Short=TIM {ECO:0000255|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000255|HAMAP-Rule:MF_00147};; Triose-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_00147}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Triosephosphate isomerase n=4 Tax=Acidiphilium RepID=TPIS_ACICJ
04302015_37_scaffold_139_11
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11204..13090
DNA (1887bp) protein (629aa)
Uncharacterized protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FXW4_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ30446.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_139_12
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13127..14641
DNA (1515bp) protein (505aa)
trpE; anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase, component I {ECO:0000313|EMBL:ABQ30445.1}; EC=4.1.3.27 {ECO:0000313|EMBL:ABQ30445.1};; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Anthranilate synthase component I n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IXW2_ACIMA
04302015_37_scaffold_139_13
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14638..16254
DNA (1617bp) protein (539aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Anthranilate phosphoribosyltransferase n=2 Tax=Acidiphilium RepID=A5FXW2_ACICJ
bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase
04302015_37_scaffold_139_14
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16251..17072
DNA (822bp) protein (274aa)
trpC; indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Indole-3-glycerol phosphate synthase n=3 Tax=Acidiphilium RepID=A5FXW1_ACICJ
04302015_37_scaffold_139_15
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17069..17542
DNA (474bp) protein (158aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=3 Tax=Acidiphilium RepID=MOAC_ACICJ
molybdenum cofactor biosynthesis protein C
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_37_scaffold_139_16
Emiliania huxleyi, Emiliania, Isochrysidales, Eukaryota

Not on your lists

comp(17443..18510)
DNA (1068bp) protein (356aa)
Uncharacterized protein (Fragment) n=1 Tax=Emiliania huxleyi CCMP1516 RepID=R1DEU1_EMIHU
Uncharacterized protein {ECO:0000313|EMBL:EOD13030.1, ECO:0000313|EnsemblProtists:EOD13030}; Flags: Fragment;; TaxID=280463 species="Eukaryota; Haptophyceae; Isochrysidales; Noelaerhabdaceae; Emiliania.;" source="Emiliania huxleyi CCMP1516.;"
hypothetical protein
04302015_37_scaffold_139_17
Burkholderia sp. 2002721687, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18756..18944
DNA (189bp) protein (63aa)
membrane protein n=1 Tax=Rhizobium giardinii RepID=UPI000374B201
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY38827.1}; TaxID=1468409 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. 2002721687.;"
04302015_37_scaffold_139_18
Salinisphaera shabanensis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19038..19703)
DNA (666bp) protein (222aa)
Putative lipoprotein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2FVX9_9GAMM
Putative lipoprotein {ECO:0000313|EMBL:ERJ18448.1}; TaxID=1033802 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera shabanensis E1L3A.;"
hypothetical protein
04302015_37_scaffold_139_19
Salinisphaera shabanensis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19700..20122)
DNA (423bp) protein (141aa)
Putative lipoprotein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2EJG2_9GAMM
Putative lipoprotein {ECO:0000313|EMBL:ERJ18447.1}; TaxID=1033802 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera shabanensis E1L3A.;"
hypothetical protein
04302015_37_scaffold_139_20
Salinisphaera shabanensis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20088..20780)
DNA (693bp) protein (231aa)
Curli production assembly/transport component CsgG protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2E3J0_9GAMM
Curli production assembly/transport component CsgG protein {ECO:0000313|EMBL:ERJ18446.1}; TaxID=1033802 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera shabanensis E1L3A.;"
hypothetical protein
04302015_37_scaffold_139_21
unknown

Not on your lists

comp(20942..21055)
DNA (114bp) protein (38aa)

This feature has no annotations

04302015_37_scaffold_139_22
unknown

Not on your lists

comp(21090..21323)
DNA (234bp) protein (78aa)

This feature has no annotations

Displaying 22 items

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