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04302015_37_scaffold_155

Search features with annotation key words

Displaying items 1-30 of 112 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_37_scaffold_155_trna_1
unknown

Not on your lists

120..193
DNA (74bp)
transferRNA Trp
04302015_37_scaffold_155_1
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

311..514
DNA (204bp) protein (68aa)
Protein translocase subunit SecE n=3 Tax=Acidiphilium RepID=A5FXB1_ACICJ
putative protein translocase subunit SecE/Sec61
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_37_scaffold_155_2
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

523..1053
DNA (531bp) protein (177aa)
Transcription termination/antitermination protein NusG n=3 Tax=Acidiphilium RepID=A5FXB0_ACICJ
nusG; transcription antitermination protein NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_155_3
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1090..2394)
DNA (1305bp) protein (435aa)
Cobalt-zinc-cadmium resistance protein CzcD n=1 Tax=Burkholderia sp. KJ006 RepID=I2DTB3_9BURK
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ABO56853.1}; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia vietnamiensis (strain G4 / LMG 22486) (Burkholderia; cepacia (strain R1808)).;"
04302015_37_scaffold_155_4
unknown

Not on your lists

2543..2980
DNA (438bp) protein (146aa)

This feature has no annotations

04302015_37_scaffold_155_5
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3051..3992
DNA (942bp) protein (314aa)
Membrane protein-like protein n=2 Tax=Acidiphilium RepID=A5G1A4_ACICJ
Uncharacterized protein {ECO:0000313|EMBL:KDM65559.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
hypothetical protein
04302015_37_scaffold_155_6
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4141..6444
DNA (2304bp) protein (768aa)
Outer membrane protein assembly factor BamA n=3 Tax=Acidiphilium RepID=A5G1A5_ACICJ
surface antigen (D15)
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_155_7
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6461..7234
DNA (774bp) protein (258aa)
Outer membrane chaperone Skp (OmpH) n=2 Tax=Acidiphilium RepID=A5G1A6_ACICJ
outer membrane chaperone Skp
Uncharacterized protein {ECO:0000313|EMBL:BAJ82110.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_37_scaffold_155_8
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7245..8306
DNA (1062bp) protein (354aa)
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000255|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000255|HAMAP-Rule:MF_00523};; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=LPXD_GRABC
04302015_37_scaffold_155_9
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8343..8846
DNA (504bp) protein (168aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=3 Tax=Acidiphilium RepID=FABZ_ACICJ
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
04302015_37_scaffold_155_10
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8843..9658
DNA (816bp) protein (272aa)
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129) rbh
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387};; EC=2.3.1.129 {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00001267};; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=3 Tax=Acidiphilium RepID=A5G1A9_ACICJ rbh
04302015_37_scaffold_155_11
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9663..10505
DNA (843bp) protein (281aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=A5G1B0_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ82114.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_37_scaffold_155_12
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10523..10918
DNA (396bp) protein (132aa)
lactoylglutathione lyase (EC:4.4.1.5)
Lactoylglutathione lyase {ECO:0000313|EMBL:EGO94172.1}; EC=4.4.1.5 {ECO:0000313|EMBL:EGO94172.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
Lactoylglutathione lyase n=3 Tax=Acidiphilium RepID=A5G1B1_ACICJ
04302015_37_scaffold_155_13
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10922..12184
DNA (1263bp) protein (421aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=F0J3X5_ACIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGO94173.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_37_scaffold_155_14
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12317..12766)
DNA (450bp) protein (150aa)
Dihydroneopterin aldolase family protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YVM5_9PROT
Dihydroneopterin aldolase {ECO:0000313|EMBL:GAN81910.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
dihydroneopterin aldolase
04302015_37_scaffold_155_15
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12873..13313
DNA (441bp) protein (147aa)
CHRD domain-containing protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YT33_9PROT
CHRD domain-containing protein {ECO:0000313|EMBL:EKM98248.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
CHRD domain-containing protein
04302015_37_scaffold_155_16
unknown

Not on your lists

13411..14247
DNA (837bp) protein (279aa)

This feature has no annotations

04302015_37_scaffold_155_17
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14221..15429)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026C930C
Uncharacterized protein {ECO:0000313|EMBL:KEO60012.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-4.;"
hypothetical protein
04302015_37_scaffold_155_18
unknown

Not on your lists

comp(15433..16044)
DNA (612bp) protein (204aa)

This feature has no annotations

04302015_37_scaffold_155_19
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16222..16752
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SPS7_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA05714.1}; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
04302015_37_scaffold_155_20
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16814..17368)
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Acidiphilium sp. PM RepID=F7SAK2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN78597.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hypothetical protein
04302015_37_scaffold_155_21
Pseudomonas sp. GM41(2012), Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17488..17772
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM41(2012) RepID=J2RCH6_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EUB73164.1}; TaxID=1144708 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM41(2012).;"
hypothetical protein
04302015_37_scaffold_155_22
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17779..18417
DNA (639bp) protein (213aa)
Uncharacterized protein n=3 Tax=Acidiphilium RepID=A5FXW9_ACICJ
Uncharacterized protein {ECO:0000313|EMBL:KDM65919.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
hypothetical protein
04302015_37_scaffold_155_23
unknown

Not on your lists

comp(18431..18673)
DNA (243bp) protein (81aa)

This feature has no annotations

04302015_37_scaffold_155_24
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18673..21129)
DNA (2457bp) protein (819aa)
UPF0753 protein RPD_0652 n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Y652_RHOPS rbh
hypothetical protein rbh
UPF0753 protein RPD_0652 {ECO:0000255|HAMAP-Rule:MF_01871}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
04302015_37_scaffold_155_25
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21142..22455)
DNA (1314bp) protein (438aa)
NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13DE8_RHOPS rbh
Oxidoreductase {ECO:0000313|EMBL:KKC34367.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
NADH/ubiquinone/plastoquinone (complex I) rbh
04302015_37_scaffold_155_26
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22742..23617
DNA (876bp) protein (292aa)
Transcriptional regulator, LysR family n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G0Z6_ACICJ rbh
LysR family transcriptional regulator rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KKC34368.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
04302015_37_scaffold_155_27
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23628..24107)
DNA (480bp) protein (160aa)
AsnC family transcriptional regulator n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J5T9_ACIMA
AsnC family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:BAJ82483.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_37_scaffold_155_28
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24246..25055
DNA (810bp) protein (270aa)
uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107)
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:BAJ82481.1}; EC=2.1.1.107 {ECO:0000313|EMBL:BAJ82481.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Uroporphyrinogen-III C-methyltransferase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J5T7_ACIMA
04302015_37_scaffold_155_29
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25060..26841
DNA (1782bp) protein (594aa)
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000256|PIRNR:PIRNR000207}; Short=SiR-FP {ECO:0000256|PIRNR:PIRNR000207};; EC=1.8.1.2 {ECO:0000256|PIRNR:PIRNR000207};; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Sulfite reductase [NADPH] flavoprotein alpha-component n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G2B0_ACICJ
flavodoxin/nitric oxide synthase
Displaying items 1-30 of 112 in total

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