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04302015_37_scaffold_182

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Displaying items 1-30 of 55 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_37_scaffold_182_1

Not on your lists

comp(159..2468)
DNA (2310bp) protein (770aa)
Putative Porin n=1 Tax=mine drainage metagenome RepID=E6QAD1_9ZZZZ
TonB-dependent receptor
Putative Porin {ECO:0000313|EMBL:CBI04157.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
04302015_37_scaffold_182_2
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2584..3822)
DNA (1239bp) protein (413aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Acidiphilium sp. PM RepID=F7S3M1_9PROT
04302015_37_scaffold_182_3
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3838..5016)
DNA (1179bp) protein (393aa)
Fructokinase {ECO:0000313|EMBL:BAJ80048.1}; EC=2.7.1.4 {ECO:0000313|EMBL:BAJ80048.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
N-acetylglucosamine kinase n=2 Tax=Acidiphilium RepID=A5FXT2_ACICJ
ROK family protein
04302015_37_scaffold_182_4
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5094..6026
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J4J8_ACIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ80050.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_37_scaffold_182_5
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6041..6304
DNA (264bp) protein (88aa)
xseB; exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Exodeoxyribonuclease 7 small subunit n=3 Tax=Acidiphilium RepID=A5FXS9_ACICJ
04302015_37_scaffold_182_6
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6325..7221
DNA (897bp) protein (299aa)
ispA; geranyltranstransferase (EC:2.5.1.10) rbh
Farnesyl diphosphate synthase {ECO:0000313|EMBL:KDM66795.1}; EC=2.5.1.10 {ECO:0000313|EMBL:KDM66795.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
Farnesyl-diphosphate synthase n=3 Tax=Acidiphilium RepID=A5FXS8_ACICJ rbh
04302015_37_scaffold_182_7
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7199..9286)
DNA (2088bp) protein (696aa)
Collagen triple helix repeat protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FXP6_ACICJ
hypothetical protein
Collagen triple helix repeat protein {ECO:0000313|EMBL:ABQ30378.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_182_8
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9540..9959)
DNA (420bp) protein (140aa)
Triple helix repeat-containing collagen n=1 Tax=Acidiphilium sp. PM RepID=F7S471_9PROT
triple helix repeat-containing collagen
Collagen triple helix repeat protein {ECO:0000313|EMBL:KDM66772.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_37_scaffold_182_9
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9959..11131)
DNA (1173bp) protein (391aa)
Collagen triple helix repeat protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FXP6_ACICJ
Uncharacterized protein {ECO:0000313|EMBL:GAN80469.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hypothetical protein
04302015_37_scaffold_182_10
unknown

Not on your lists

comp(11121..11378)
DNA (258bp) protein (86aa)

This feature has no annotations

04302015_37_scaffold_182_11
unknown

Not on your lists

11827..12018
DNA (192bp) protein (64aa)

This feature has no annotations

04302015_37_scaffold_182_12
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12193..12537
DNA (345bp) protein (115aa)
UPF0145 protein Acry_1752 n=3 Tax=Acidiphilium RepID=Y1752_ACICJ
hypothetical protein
UPF0145 protein ACIDI_55c00150 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_37_scaffold_182_13
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12521..13216)
DNA (696bp) protein (232aa)
dnaQ; DNA polymerase III epsilon subunit (EC:2.7.7.7)
DNA polymerase III epsilon subunit {ECO:0000313|EMBL:BAJ82443.1}; EC=2.7.7.7 {ECO:0000313|EMBL:BAJ82443.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
DNA polymerase III epsilon subunit n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J5P9_ACIMA
04302015_37_scaffold_182_14
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13223..13840)
DNA (618bp) protein (206aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Dephospho-CoA kinase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J5P3_ACIMA
04302015_37_scaffold_182_15
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13844..14674)
DNA (831bp) protein (277aa)
aroE; shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
Shikimate dehydrogenase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J5P4_ACIMA
04302015_37_scaffold_182_16
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14734..15852)
DNA (1119bp) protein (373aa)
Acyl-CoA dehydrogenase domain protein n=2 Tax=Acidiphilium RepID=A5FV48_ACICJ
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABQ29480.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_182_17
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15985..17196)
DNA (1212bp) protein (404aa)
putative acyl-CoA dehydrogenase (EC:1.3.99.-)
Putative acyl-CoA dehydrogenase FadE {ECO:0000313|EMBL:KDM66377.1}; EC=1.3.99.- {ECO:0000313|EMBL:KDM66377.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
Putative acyl-CoA dehydrogenase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J241_ACIMA
04302015_37_scaffold_182_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17210..18391)
DNA (1182bp) protein (394aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16) rbh
Probable thiolase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLI0_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_37_scaffold_182_19
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18401..20092)
DNA (1692bp) protein (564aa)
AMP-dependent synthetase and ligase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FV50_ACICJ
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABQ29482.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_182_20
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20089..22200)
DNA (2112bp) protein (704aa)
Fatty acid oxidation complex subunit alpha {ECO:0000313|EMBL:KDM66374.1}; EC=1.1.1.35 {ECO:0000313|EMBL:KDM66374.1};; EC=4.2.1.17 {ECO:0000313|EMBL:KDM66374.1};; EC=5.1.2.3 {ECO:0000313|EMBL:KDM66374.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FV51_ACICJ
NAD-binding 3-hydroxyacyl-CoA dehydrogenase
04302015_37_scaffold_182_21
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22311..22478)
DNA (168bp) protein (56aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN79645.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
04302015_37_scaffold_182_22
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22478..23197)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI000382998B
Putative membrane protein {ECO:0000313|EMBL:KFZ90026.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
putative High-affinity Fe2+/Pb2+ permease
04302015_37_scaffold_182_23
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23197..24258)
DNA (1062bp) protein (354aa)
Sulfate/thiosulfate import ATP-binding protein CysA 2 {ECO:0000313|EMBL:KDM67689.1}; EC=3.6.3.25 {ECO:0000313|EMBL:KDM67689.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
ABC transporter related protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FV94_ACICJ rbh
ABC transporter-like protein rbh
04302015_37_scaffold_182_24
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24255..25841)
DNA (1587bp) protein (529aa)
ABC-type Fe3+ transport system permease component-like protein n=2 Tax=Acidiphilium RepID=F7S5E4_9PROT rbh
putative ABC transporter permease rbh
Putative ABC transporter permease protein {ECO:0000313|EMBL:BAJ79676.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_37_scaffold_182_25
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25838..26842)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J2N6_ACIMA rbh
ABC-type Fe3+ transport system, periplasmic component {ECO:0000313|EMBL:KDM67687.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
hypothetical protein rbh
04302015_37_scaffold_182_26
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26781..28358)
DNA (1578bp) protein (526aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J245_ACIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ79631.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_37_scaffold_182_27
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28355..30250)
DNA (1896bp) protein (632aa)
Sulfotransferase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FV54_ACICJ
sulfotransferase
Sulfotransferase {ECO:0000313|EMBL:ABQ29486.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_182_28
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30254..31315
DNA (1062bp) protein (354aa)
Rubrerythrin n=3 Tax=Acidiphilium RepID=A5FV55_ACICJ
rubrerythrin
Uncharacterized protein {ECO:0000313|EMBL:BAJ79633.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_37_scaffold_182_29
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31378..32334
DNA (957bp) protein (319aa)
2-nitropropane dioxygenase, NPD n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FV56_ACICJ
2-nitropropane dioxygenase
2-nitropropane dioxygenase, NPD {ECO:0000313|EMBL:ABQ29488.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_182_30
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32384..33259
DNA (876bp) protein (292aa)
Putative membrane protein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QPC5_BORBO
hypothetical protein
EamA-like transporter family protein {ECO:0000313|EMBL:KCV63934.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
Displaying items 1-30 of 55 in total

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