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04302015_37_scaffold_32

Search features with annotation key words

Displaying items 1-30 of 48 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_37_scaffold_32_1
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..246)
DNA (246bp) protein (82aa)
Uncharacterized protein n=3 Tax=Acidiphilium RepID=A5G0B7_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGO93895.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_37_scaffold_32_2
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(429..1844)
DNA (1416bp) protein (472aa)
aldehyde dehydrogenase (EC:1.2.1.-)
Aldehyde dehydrogenase n=2 Tax=Acidiphilium RepID=F0IXY1_ACIMA
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_37_scaffold_32_3
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1838..2542)
DNA (705bp) protein (235aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JGQ2_HYPSM
3-oxoacyl-ACP reductase
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:AJF00495.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
04302015_37_scaffold_32_4
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2555..3397)
DNA (843bp) protein (281aa)
Esterase/lipase-like protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FYF9_ACICJ
esterase/lipase-like protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ80826.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_37_scaffold_32_5
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3579..4328)
DNA (750bp) protein (250aa)
fliP; flagellar biosynthesis protein FliP (EC:3.1.1.3)
Flagellar biosynthetic protein FliP n=3 Tax=Acidiphilium RepID=A5G0F2_ACICJ
Flagellar biosynthetic protein FliP {ECO:0000313|EMBL:KDM67049.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_37_scaffold_32_6
unknown

Not on your lists

comp(4328..4609)
DNA (282bp) protein (94aa)

This feature has no annotations

04302015_37_scaffold_32_7
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4828..5208
DNA (381bp) protein (127aa)
Flagellar basal body protein-like protein n=2 Tax=Acidiphilium RepID=A5G0F1_ACICJ
flagellar basal body protein-like protein
Flagellar basal body protein-like protein {ECO:0000313|EMBL:EGO94981.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_37_scaffold_32_8
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5240..5644
DNA (405bp) protein (135aa)
Flagellar basal-body rod protein FlgC n=3 Tax=Acidiphilium RepID=A5G0F0_ACICJ
flgC; flagellar basal-body rod protein FlgC
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_37_scaffold_32_9
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5644..5955
DNA (312bp) protein (104aa)
Flagellar hook-basal body complex protein FliE n=3 Tax=Acidiphilium RepID=A5G0E9_ACICJ
fliE; flagellar hook-basal body complex protein FliE
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_37_scaffold_32_10
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6022..6288
DNA (267bp) protein (89aa)
Export protein FliQ, family 3 n=3 Tax=Acidiphilium RepID=A5G0E8_ACICJ
export protein FliQ
Export protein FliQ {ECO:0000313|EMBL:EGO94984.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_37_scaffold_32_11
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6278..7069
DNA (792bp) protein (264aa)
Type III secretion system inner membrane R protein n=3 Tax=Acidiphilium RepID=A5G0E7_ACICJ
type III secretion system inner membrane R protein
Type III secretion system inner membrane R protein {ECO:0000313|EMBL:EGO94985.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_37_scaffold_32_12
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7150..8175
DNA (1026bp) protein (342aa)
Type III secretion exporter n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G0E6_ACICJ
type III secretion exporter
Type III secretion exporter {ECO:0000313|EMBL:ABQ31328.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_32_13
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8166..8822)
DNA (657bp) protein (219aa)
Peptidase S16, lon domain protein n=2 Tax=Acidiphilium RepID=A5G0E5_ACICJ
peptidase S16 family protein
Peptidase S16, lon domain protein {ECO:0000313|EMBL:ABQ31327.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_32_14
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8837..9721)
DNA (885bp) protein (295aa)
Thioredoxin domain protein n=3 Tax=Acidiphilium RepID=A5G0E4_ACICJ
putative thioredoxin
Thioredoxin domain protein {ECO:0000313|EMBL:ABQ31326.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_32_15
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10088..11185
DNA (1098bp) protein (366aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IE64_XANP2
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABS66307.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
04302015_37_scaffold_32_16
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11182..14190
DNA (3009bp) protein (1003aa)
Multidrug efflux protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XP33_9PROT rbh
Multidrug efflux protein {ECO:0000313|EMBL:EKM98444.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
RND multidrug efflux transporter
04302015_37_scaffold_32_17
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14187..15782
DNA (1596bp) protein (532aa)
Tripartite multidrug resistance system outer membrane protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZFS0_9PROT rbh
Tripartite multidrug resistance system outer membrane protein {ECO:0000313|EMBL:EKM98445.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
NodT family RND efflux system outer membrane lipoprotein
04302015_37_scaffold_32_18

Not on your lists

15850..17022
DNA (1173bp) protein (391aa)
Putative AIR synthase related protein, C-terminal domain protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC90_9ZZZZ
Putative AIR synthase related protein, C-terminal domain protein {ECO:0000313|EMBL:ABZ10199.1}; TaxID=455560 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG10H12.;"
selenide, water dikinase
04302015_37_scaffold_32_19
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17010..18020)
DNA (1011bp) protein (337aa)
Flagellar motor switch protein FliM n=3 Tax=Acidiphilium RepID=A5FX59_ACICJ
fliM; flagellar motor switch protein
Flagellar motor switch protein FliM {ECO:0000256|PIRNR:PIRNR002888}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_32_20
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18511..19122
DNA (612bp) protein (204aa)
ArsR family transcriptional regulator n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J0U7_ACIMA
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:BAJ81633.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_37_scaffold_32_21
unknown

Not on your lists

19119..19229
DNA (111bp) protein (37aa)

This feature has no annotations

04302015_37_scaffold_32_22
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19219..20661
DNA (1443bp) protein (481aa)
Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YVQ8_9PROT
Cytochrome bd ubiquinol oxidase subunit I {ECO:0000313|EMBL:GAN80628.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
cytochrome bd ubiquinol oxidase subunit I rbh
04302015_37_scaffold_32_23
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20706..21761
DNA (1056bp) protein (352aa)
Cytochrome bd ubiquinol oxidase subunit II n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YJ55_9PROT
Cytochrome D ubiquinol oxidase subunit II {ECO:0000313|EMBL:KDB01966.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
cytochrome bd ubiquinol oxidase subunit II rbh
04302015_37_scaffold_32_24
unknown

Not on your lists

21772..22005
DNA (234bp) protein (78aa)

This feature has no annotations

04302015_37_scaffold_32_25
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22009..23769
DNA (1761bp) protein (587aa)
Cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydD n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GTT8_9GAMM rbh
Thiol reductant ABC exporter, CydD subunit {ECO:0000313|EMBL:KFZ91412.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
cysteine export CydDC family ABC transporter permease/ATP-binding protein CydD rbh
04302015_37_scaffold_32_26
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23766..25436
DNA (1671bp) protein (557aa)
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC n=1 Tax=Thiocapsa marina 5811 RepID=F9UIB7_9GAMM rbh
Cysteine/glutathione ABC transporter membrane/ATP-binding component {ECO:0000313|EMBL:KFZ91413.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
cysteine ABC transporter permease
04302015_37_scaffold_32_27
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25576..27153)
DNA (1578bp) protein (526aa)
Drug resistance transporter, EmrB/QacA subfamily n=3 Tax=Acidiphilium RepID=A5FZR0_ACICJ
EmrB/QacA family drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ABQ31092.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_32_28
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27168..28298)
DNA (1131bp) protein (377aa)
Secretion protein HlyD family protein n=2 Tax=Acidiphilium RepID=A5FZQ9_ACICJ
HlyD family secretion protein
Multidrug export protein EmrA {ECO:0000313|EMBL:KDM65853.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_37_scaffold_32_29
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28298..28930)
DNA (633bp) protein (211aa)
MarR family transcriptional regulator n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J0B9_ACIMA
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:BAJ81479.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_37_scaffold_32_30
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29056..31005
DNA (1950bp) protein (650aa)
Methyl-accepting chemotaxis protein McpU n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R8I5_PHEZH rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:GAN79396.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
mcpU; methyl-accepting chemotaxis protein McpU rbh
Displaying items 1-30 of 48 in total

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