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04302015_37_scaffold_61

Search features with annotation key words

Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_37_scaffold_61_1
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

164..508
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z1J3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKN00813.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein
04302015_37_scaffold_61_2
unknown

Not on your lists

543..749
DNA (207bp) protein (69aa)

This feature has no annotations

04302015_37_scaffold_61_3
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(819..1688)
DNA (870bp) protein (290aa)
Phytanoyl-CoA dioxygenase (PhyH) family n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y0Y6_9PROT
Phytanoyl-CoA dioxygenase (PhyH) family {ECO:0000313|EMBL:EGY00820.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
hypothetical protein
04302015_37_scaffold_61_4
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1748..2731)
DNA (984bp) protein (328aa)
malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Malate dehydrogenase n=3 Tax=Acidiphilium RepID=MDH_ACICJ
04302015_37_scaffold_61_5
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2814..3398
DNA (585bp) protein (195aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=F0IXJ2_ACIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGO95837.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_37_scaffold_61_6
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3553..3882
DNA (330bp) protein (110aa)
Uncharacterized protein {ECO:0000313|EMBL:BAJ80527.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_37_scaffold_61_7
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3991..4932)
DNA (942bp) protein (314aa)
Transcriptional regulator, LysR family n=2 Tax=Acidiphilium RepID=A5G323_ACICJ
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:KDM68511.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_37_scaffold_61_8
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5030..6085
DNA (1056bp) protein (352aa)
fusaric acid resistance protein FusB n=1 Tax=Acetobacter aceti RepID=UPI0002260172
Uncharacterized protein {ECO:0000313|EMBL:KDM67010.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
fusB; fusaric acid resistance protein FusB
04302015_37_scaffold_61_9
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6082..6300
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:KDM67009.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_37_scaffold_61_10
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6311..7258
DNA (948bp) protein (316aa)
HlyD family secretion protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J6X7_ACIMA
HlyD family secretion protein {ECO:0000313|EMBL:KDM67008.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
HlyD family secretion protein
04302015_37_scaffold_61_11
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7303..7770)
DNA (468bp) protein (156aa)
Heat shock protein Hsp20 n=3 Tax=Acidiphilium RepID=A5G1U1_ACICJ
small heat shock protein
Heat shock protein Hsp20 {ECO:0000313|EMBL:EGO95545.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_37_scaffold_61_12
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8087..8314)
DNA (228bp) protein (76aa)
50S ribosomal protein L31 n=3 Tax=Acidiphilium RepID=RL31_ACICJ
rpmE; 50S ribosomal protein L31
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_37_scaffold_61_13
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8427..9407)
DNA (981bp) protein (327aa)
Aldo/keto reductase n=3 Tax=Acidiphilium RepID=A5FZX7_ACICJ rbh
putative aldo/keto reductase rbh
Aldo/keto reductase {ECO:0000313|EMBL:EGO94125.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_37_scaffold_61_14
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9489..11369)
DNA (1881bp) protein (627aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E8F17F
PerM protein {ECO:0000313|EMBL:BAQ45704.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
hypothetical protein
04302015_37_scaffold_61_15
unknown

Not on your lists

comp(11615..11791)
DNA (177bp) protein (59aa)

This feature has no annotations

04302015_37_scaffold_61_16
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11895..12215)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A481_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHL98306.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
04302015_37_scaffold_61_17
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12233..13405)
DNA (1173bp) protein (391aa)
Putative uncharacterized protein n=1 Tax=Acidiphilium sp. PM RepID=F7S4Y3_9PROT rbh
Flavoprotein {ECO:0000313|EMBL:KDM65995.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
hypothetical protein rbh
04302015_37_scaffold_61_18
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13446..13853
DNA (408bp) protein (136aa)
Uncharacterized protein n=3 Tax=Acidiphilium RepID=A5FVW0_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ29742.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_61_19
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13900..14844
DNA (945bp) protein (315aa)
Transcriptional regulator, LysR family n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G176_ACICJ rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABQ31608.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_61_20
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15101..16150
DNA (1050bp) protein (350aa)
Glycosyl transferase, group 1 n=2 Tax=Acidiphilium RepID=F7S7K0_9PROT rbh
putative glycosyltransferase rbh
Glycosyl transferase, group 1 {ECO:0000313|EMBL:EGO94873.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_37_scaffold_61_21
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16147..17376
DNA (1230bp) protein (410aa)
UDP-phosphate N-acetylgalactosaminyl-1-phosphate transferase (EC:2.7.8.-)
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase {ECO:0000313|EMBL:BAJ82090.1}; EC=2.7.8.- {ECO:0000313|EMBL:BAJ82090.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Glycosyl transferase, family 4 n=3 Tax=Acidiphilium RepID=A5G177_ACICJ
04302015_37_scaffold_61_22
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17395..18870)
DNA (1476bp) protein (492aa)
Ppx/GppA phosphatase n=3 Tax=Acidiphilium RepID=A5G1K1_ACICJ rbh
Ppx/GppA phosphatase rbh
Ppx/GppA phosphatase {ECO:0000313|EMBL:ABQ31733.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_61_23
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19098..20294
DNA (1197bp) protein (399aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Acetylornithine aminotransferase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G1K0_ACICJ
argD; acetylornithine transaminase protein
04302015_37_scaffold_61_24
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20291..21229
DNA (939bp) protein (313aa)
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
Ornithine carbamoyltransferase n=3 Tax=Acidiphilium RepID=A5G1J9_ACICJ
04302015_37_scaffold_61_25
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21314..21475)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J468_ACIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ82209.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_37_scaffold_61_26
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21565..22140)
DNA (576bp) protein (192aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G1J7_ACICJ
purN; phosphoribosylglycinamide formyltransferase
04302015_37_scaffold_61_27
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22182..23252)
DNA (1071bp) protein (357aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Phosphoribosylformylglycinamidine cyclo-ligase n=2 Tax=Acidiphilium RepID=A5G1J6_ACICJ
04302015_37_scaffold_61_28
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23404..23979
DNA (576bp) protein (192aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:AHJ63926.1}; EC=2.7.8.5 {ECO:0000313|EMBL:AHJ63926.1};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQG8_GRABC
04302015_37_scaffold_61_29
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23976..25070
DNA (1095bp) protein (365aa)
Uncharacterized protein n=3 Tax=Acidiphilium RepID=A5G1J5_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ31727.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_61_30
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25063..25815
DNA (753bp) protein (251aa)
ATPase involved in DNA replication initiation-like protein n=3 Tax=Acidiphilium RepID=A5G1J4_ACICJ
DNA replication initiation ATPase-like protein
ATPase involved in DNA replication initiation-like protein {ECO:0000313|EMBL:ABQ31726.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Displaying items 1-30 of 38 in total

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