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04302015_37_Hypocreales_59_5

In projects: 04302015_37

Consensus taxonomy: Hypocreales  →  Hypocreomycetidae  →  Ascomycota  →  Fungi

Metagenomic Context

Parent: 04302015_37_UNK

Properties

Avg. coverage: 5.05 Longest contig: 32.00 Kbp Bin length: 24.76 Mbp GC content: 59.32 %
Contigs count: 6209 Features count: 26714 rRNAs count: 1 tRNAs count: 50

Genome completeness

partial RP 39 / 55 MC: 28 BSCG 20 / 51 MC: 6 ASCG 26 / 38 MC: 8
Displaying items 1-50 of 6209 in total
contig # features sequence size GC content (%) Cov Coding Density (%) notes
04302015_37_scaffold_537
Class: Hypocreomycetidae (53.33%)
30 22573 bp 57.37 4.99 66.27
04302015_37_scaffold_367 28 17423 bp 60.83 4.97 65.29
04302015_37_scaffold_637
Phylum: Ascomycota (53.57%)
28 20112 bp 54.85 5.06 51.97
04302015_37_scaffold_143 28 18982 bp 58.00 5.37 67.30
04302015_37_scaffold_260 27 12769 bp 59.99 5.30 65.76
04302015_37_scaffold_949 25 17676 bp 60.10 5.34 63.31
04302015_37_scaffold_246 25 16701 bp 62.01 5.43 72.07
04302015_37_scaffold_281 25 14467 bp 57.59 4.56 75.52
04302015_37_scaffold_581 25 14622 bp 60.11 5.02 70.72
04302015_37_scaffold_252
Order: Hypocreales (58.33%)
24 32004 bp 61.89 5.49 69.91
04302015_37_scaffold_670 23 17149 bp 61.82 5.23 81.80
04302015_37_scaffold_272 23 19767 bp 58.78 5.15 65.82
04302015_37_scaffold_663 23 14542 bp 59.63 4.81 69.25
04302015_37_scaffold_2580 22 12726 bp 57.27 5.16 69.26
04302015_37_scaffold_372 22 15314 bp 58.55 5.48 76.56
04302015_37_scaffold_340 21 16253 bp 54.91 8.60 63.50
04302015_37_scaffold_1604 21 12698 bp 62.00 5.24 62.84
04302015_37_scaffold_1648 20 12345 bp 59.39 5.46 59.54
04302015_37_scaffold_667 20 11436 bp 60.20 5.13 56.95
04302015_37_scaffold_1402 20 16922 bp 55.53 5.15 59.30
04302015_37_scaffold_2449 20 12555 bp 60.22 4.92 68.03
04302015_37_scaffold_999 20 12346 bp 60.29 5.10 68.48
04302015_37_scaffold_1730
Order: Hypocreales (60%)
20 20113 bp 56.54 4.63 77.02
04302015_37_scaffold_344 20 11708 bp 60.70 4.98 78.51
04302015_37_scaffold_1182 19 11075 bp 59.21 4.90 66.53
04302015_37_scaffold_456 19 10045 bp 56.16 5.51 65.94
04302015_37_scaffold_1197 19 12970 bp 56.24 5.19 59.44
04302015_37_scaffold_475
Order: Hypocreales (52.63%)
19 15554 bp 54.82 9.88 79.39
04302015_37_scaffold_734 19 12031 bp 59.43 4.78 78.40
04302015_37_scaffold_223 19 14075 bp 59.23 8.99 46.55
04302015_37_scaffold_230 19 17659 bp 57.42 5.49 65.93
04302015_37_scaffold_285 19 13356 bp 59.11 4.75 52.70
04302015_37_scaffold_318 19 11422 bp 55.69 5.10 57.65
04302015_37_scaffold_326
Order: Hypocreales (57.89%)
19 14532 bp 60.34 5.34 44.53
04302015_37_scaffold_1334 19 11195 bp 60.45 5.56 91.25
04302015_37_scaffold_394 19 10422 bp 57.95 4.62 59.57
04302015_37_scaffold_2952
Phylum: Ascomycota (50%)
18 7907 bp 57.95 5.79 80.32
04302015_37_scaffold_937 18 10166 bp 58.35 5.09 75.13
04302015_37_scaffold_1410 18 9032 bp 60.91 5.28 68.48
04302015_37_scaffold_429 18 11536 bp 59.54 5.07 69.49
04302015_37_scaffold_695
Order: Hypocreales (55.56%)
18 14572 bp 59.94 5.16 67.61
04302015_37_scaffold_708 18 14580 bp 61.54 5.22 72.00
04302015_37_scaffold_728 18 11086 bp 57.85 5.53 72.39
04302015_37_scaffold_2240 18 10279 bp 56.88 4.82 57.50
04302015_37_scaffold_527 18 10553 bp 55.79 5.12 72.21
04302015_37_scaffold_1010 18 15251 bp 60.43 4.33 67.23
04302015_37_scaffold_551 18 9080 bp 61.13 4.86 82.73
04302015_37_scaffold_302 18 14327 bp 56.01 4.65 47.07
04302015_37_scaffold_1569 18 10046 bp 60.89 5.14 70.95
04302015_37_scaffold_867 18 11564 bp 60.24 5.08 69.55
Displaying items 1-50 of 6209 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.