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04302015_37_scaffold_4213

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_37_scaffold_4213_1
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..604)
DNA (603bp) protein (201aa)
Secretion protein HlyD family protein n=1 Tax=Acidiphilium sp. PM RepID=F7S3Y0_9PROT
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:EGO96136.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_37_scaffold_4213_2
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(804..1028)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IZH7_ACIMA
Uncharacterized protein {ECO:0000313|EMBL:KDM65608.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
hypothetical protein
04302015_37_scaffold_4213_3
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1161..2048)
DNA (888bp) protein (296aa)
Transcriptional regulator, LysR family n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FZG3_ACICJ rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABQ30995.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_37_scaffold_4213_4
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2159..3682
DNA (1524bp) protein (508aa)
mmsA; methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27) rbh
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:BAJ81185.1}; EC=1.2.1.27 {ECO:0000313|EMBL:BAJ81185.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IZH5_ACIMA rbh
04302015_37_scaffold_4213_5
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3960..4568)
DNA (609bp) protein (203aa)
putative 2'-5' RNA ligase (EC:6.5.1.-) rbh
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
2'-5' RNA ligase n=2 Tax=Acidiphilium RepID=A5FZG1_ACICJ rbh
04302015_37_scaffold_4213_6
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4709..5467)
DNA (759bp) protein (253aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_01110, ECO:0000256|SAAS:SAAS00015955}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_01110};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_01110, ECO:0000256|SAAS:SAAS00015955};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01110}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
N-acetyl-gamma-glutamyl-phosphate reductase n=2 Tax=Acidiphilium RepID=A5FZG0_ACICJ
04302015_37_scaffold_4213_7
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5552..6052
DNA (501bp) protein (167aa)
Protein-export protein SecB n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IZH2_ACIMA rbh
secB; protein-export protein SecB rbh
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_37_scaffold_4213_8
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6118..7521
DNA (1404bp) protein (468aa)
Threonine synthase {ECO:0000313|EMBL:EGO96142.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EGO96142.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
thrC; threonine synthase (EC:4.2.3.1) rbh
Threonine synthase n=1 Tax=Acidiphilium sp. PM RepID=F7S3Y6_9PROT rbh
04302015_37_scaffold_4213_9
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7518..8351
DNA (834bp) protein (278aa)
processing peptidase (EC:3.4.24.64)
Processing peptidase {ECO:0000313|EMBL:ABQ30989.1}; EC=3.4.24.64 {ECO:0000313|EMBL:ABQ30989.1};; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Processing peptidase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FZF7_ACICJ
Displaying 9 items

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