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04302015_37_scaffold_69

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Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_37_scaffold_69_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..243)
DNA (243bp) protein (81aa)
Putative integrase prophage protein id=1343000 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cp4-like integrase
Tax=GWE1_Thiobacillus_62_9_curated
04302015_37_scaffold_69_2
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

860..2134
DNA (1275bp) protein (425aa)
DEAD/DEAH box helicase n=1 Tax=Methylotenera RepID=UPI0003627DE1
DEAD/DEAH box helicase domain-containing protein
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ADI29501.1}; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versatilis (strain 301).;"
04302015_37_scaffold_69_3
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2134..2412
DNA (279bp) protein (93aa)
UPF0235 protein azo3464 n=1 Tax=Azoarcus sp. (strain BH72) RepID=Y3464_AZOSB
hypothetical protein
UPF0235 protein PG1C_13230 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
04302015_37_scaffold_69_4
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2572..4062
DNA (1491bp) protein (497aa)
glcD; glycolate oxidase (FAD-linked subunit) oxidoreductase (EC:1.1.3.15) rbh
Glycolate oxidase (FAD-linked subunit) oxidoreductase protein {ECO:0000313|EMBL:CAI08670.1}; EC=1.1.3.15 {ECO:0000313|EMBL:CAI08670.1};; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
FAD-binding protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000373E775 rbh
04302015_37_scaffold_69_5
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4064..5119
DNA (1056bp) protein (352aa)
FAD linked oxidase domain protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GIU9_NITSI
FAD linked oxidase domain-containing protein
FAD linked oxidase domain protein {ECO:0000313|EMBL:AEJ02696.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
04302015_37_scaffold_69_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5121..6347
DNA (1227bp) protein (409aa)
Glycolate dehydrogenase, iron-sulfur subunit GlcF n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGV6_9PROT rbh
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139, ECO:0000313|EMBL:KIO49640.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein rbh
04302015_37_scaffold_69_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6324..7214)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL13 RepID=U9I7Q7_PSEAI
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:CKH09387.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein
04302015_37_scaffold_69_8
RLO_PLX_64_10, Bacteria

Not on your lists

7495..8199
DNA (705bp) protein (235aa)
Pirin-like protein n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1H087_METFK
Pirin-like protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
04302015_37_scaffold_69_9
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8208..8921
DNA (714bp) protein (238aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G5Q6_9GAMM
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
sugar fermentation stimulation protein
04302015_37_scaffold_69_10
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8959..9933
DNA (975bp) protein (325aa)
NADPH:quinone reductase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AC93_9PROT rbh
NADPH:quinone reductase {ECO:0000313|EMBL:EME70423.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
NADPH:quinone reductase and related Zn-dependent oxidoreductase rbh
04302015_37_scaffold_69_11
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9936..10163
DNA (228bp) protein (76aa)
response regulator SirA n=1 Tax=Rhodocyclaceae RepID=UPI000382A061
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
04302015_37_scaffold_69_12
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10175..10639
DNA (465bp) protein (155aa)
Putative uncharacterized protein id=4770730 bin=GWC2_Deltaproteobacteria_66_88 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
04302015_37_scaffold_69_13
Methylotenera mobilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10646..11392
DNA (747bp) protein (249aa)
sirohydrochlorin ferrochelatase n=1 Tax=Methylotenera mobilis RepID=UPI00037E233B
uroporphyrin-III C-methyltransferase
Siroheme synthase {ECO:0000256|HAMAP-Rule:MF_01646}; TaxID=583345 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540).;"
04302015_37_scaffold_69_14
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11431..11625
DNA (195bp) protein (65aa)
membrane protein n=1 Tax=Curvibacter lanceolatus RepID=UPI0003802A15
hypothetical protein
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
04302015_37_scaffold_69_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11626..12879)
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000363A7A3 rbh
collagenase-like protease rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_37_scaffold_69_16

Not on your lists

comp(12886..13545)
DNA (660bp) protein (220aa)
Phosphoglycolate phosphatase, bacterial n=1 Tax=mine drainage metagenome RepID=T1BG24_9ZZZZ
Phosphoglycolate phosphatase, bacterial {ECO:0000313|EMBL:EQD67553.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
phosphoglycolate phosphatase
04302015_37_scaffold_69_17
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13542..14240)
DNA (699bp) protein (233aa)
ubiG; 3-demethylubiquinone-9 3-O-methyltransferase (EC:2.1.1.64)
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HVP8_9BURK rbh
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;"
04302015_37_scaffold_69_18
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14250..14903)
DNA (654bp) protein (218aa)
Outer membrane protein A n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VTZ1_9BURK
Outer membrane protein A {ECO:0000313|EMBL:EGF33931.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
OmpA/MotB
04302015_37_scaffold_69_19

Not on your lists


15049..17673
DNA (2625bp) protein (875aa)
DNA gyrase subunit A {ECO:0000313|EMBL:EQD70918.1}; EC=5.99.1.3 {ECO:0000313|EMBL:EQD70918.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
DNA gyrase subunit A n=1 Tax=mine drainage metagenome RepID=T1BQQ5_9ZZZZ rbh
DNA gyrase subunit A rbh
04302015_37_scaffold_69_20

Not on your lists

17679..18758
DNA (1080bp) protein (360aa)
Phosphoserine aminotransferase {ECO:0000313|EMBL:EQD70919.1}; EC=2.6.1.52 {ECO:0000313|EMBL:EQD70919.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=mine drainage metagenome RepID=T1CQY7_9ZZZZ rbh
04302015_37_scaffold_69_21
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18751..19830
DNA (1080bp) protein (360aa)
Chorismate mutase n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4KB61_THASP rbh
chorismate mutase rbh
Chorismate mutase {ECO:0000313|EMBL:ENO88449.1}; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.;"
04302015_37_scaffold_69_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19827..20927
DNA (1101bp) protein (367aa)
Histidinol-phosphate aminotransferase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CTY0_SIDLE rbh
histidinol-phosphate aminotransferase rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_37_scaffold_69_23
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20931..21809
DNA (879bp) protein (293aa)
prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0EJM0_9BURK
Prephenate dehydrogenase {ECO:0000313|EMBL:EOA06131.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;"
04302015_37_scaffold_69_24
Methylophaga lonarensis, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21828..23132
DNA (1305bp) protein (435aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1286106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga lonarensis MPL.;"
cyclohexadienyl dehydrogenase / 5-Enolpyruvylshikimate-3-phosphate synthase (EC:2.5.1.19 1.3.1.12) rbh
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Methylophaga lonarensis MPL RepID=M7PSW8_9GAMM rbh
04302015_37_scaffold_69_25

Not on your lists

23129..23785
DNA (657bp) protein (219aa)
Cytidylate kinase {ECO:0000313|EMBL:EQD29599.1}; EC=2.7.4.14 {ECO:0000313|EMBL:EQD29599.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Cytidylate kinase n=1 Tax=mine drainage metagenome RepID=T0ZLL3_9ZZZZ
Cytidylate kinase
04302015_37_scaffold_69_26
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


23917..25632
DNA (1716bp) protein (572aa)
30S ribosomal protein S1 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL05_9PROT rbh
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
30S ribosomal protein S1 rbh
04302015_37_scaffold_69_27

Not on your lists

25641..25943
DNA (303bp) protein (101aa)
Integration host factor, beta subunit n=1 Tax=mine drainage metagenome RepID=T1C2U0_9ZZZZ
Integration host factor, beta subunit {ECO:0000313|EMBL:EQD75193.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
integration host factor subunit beta
04302015_37_scaffold_69_28
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26011..26331
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SF79_GALCS
hypothetical protein
Tax=GWA2_Gallionellales_54_124_curated
04302015_37_scaffold_69_29
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26355..27551
DNA (1197bp) protein (399aa)
Tetratricopeptide repeat protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AFZ7_9PROT rbh
Lipopolysaccharide assembly protein B {ECO:0000256|HAMAP-Rule:MF_00994}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
tetratricopeptide repeat protein rbh
04302015_37_scaffold_69_30
Pseudoalteromonas luteoviolacea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27551..28267
DNA (717bp) protein (239aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=1268239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas luteoviolacea B = ATCC 29581.;"
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
orotidine 5''''-phosphate decarboxylase n=1 Tax=Succinivibrionaceae bacterium WG-1 RepID=UPI0002556555
Displaying items 1-30 of 34 in total

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