ggKbase home page

04302015_37_scaffold_193

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_37_scaffold_193_1
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15..671)
DNA (657bp) protein (219aa)
Cupin domain protein id=4430749 bin=GWA2_Deltaproteo_65_63 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria rbh
XRE family transcriptional regulator
Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
04302015_37_scaffold_193_2
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(652..1203)
DNA (552bp) protein (184aa)
Pyruvate/ketoisovalerate oxidoreductase id=4430750 bin=GWA2_Deltaproteo_65_63 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria rbh
ketoisovalerate oxidoreductase subunit VorA
Tax=CG_Delta_02
04302015_37_scaffold_193_3
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1200..1979)
DNA (780bp) protein (260aa)
2-oxoacid:ferredoxin oxidoreductase, thiamin diphosphate-binding subunit id=4430751 bin=GWA2_Deltaproteo_65_63 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria rbh
thiamine pyrophosphate TPP-binding domain-containing protein rbh
Tax=CG_Delta_02
04302015_37_scaffold_193_4
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1976..3055)
DNA (1080bp) protein (360aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein id=4430752 bin=GWA2_Deltaproteo_65_63 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria rbh
2-ketoisovalerate ferredoxin reductase rbh
Tax=CG_Delta_02
04302015_37_scaffold_193_5
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3052..3276)
DNA (225bp) protein (75aa)
4Fe-4S dicluster domain protein id=4430753 bin=GWA2_Deltaproteo_65_63 species=Mogibacterium sp. CM50 genus=Mogibacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
tungsten formylmethanofuran dehydrogenase
Tax=GWA2_Deltaproteobacteria_65_63_curated
04302015_37_scaffold_193_6
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3280..4236)
DNA (957bp) protein (319aa)
Fructose-1,6-bisphosphatase id=4430754 bin=GWA2_Deltaproteo_65_63 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria rbh
glpX; fructose 1,6-bisphosphatase II rbh
Tax=CG_Delta_02
04302015_37_scaffold_193_7
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4239..4658)
DNA (420bp) protein (140aa)
Thioesterase family protein id=1814807 bin=GWB2_Deltaproteobacteria_65_81 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
4-hydroxybenzoyl-CoA thioesterase
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
04302015_37_scaffold_193_8
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4660..5865)
DNA (1206bp) protein (402aa)
Proposed homoserine kinase id=4430756 bin=GWA2_Deltaproteo_65_63 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria rbh
cofactor-independent phosphoglycerate mutase rbh
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
04302015_37_scaffold_193_9
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5882..6937)
DNA (1056bp) protein (352aa)
L-threonine synthase (EC:4.2.3.1) rbh
L-threonine synthase id=4430757 bin=GWA2_Deltaproteo_65_63 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria rbh
Tax=CG_Delta_02
04302015_37_scaffold_193_10
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6954..8279)
DNA (1326bp) protein (442aa)
Homoserine dehydrogenase id=1814819 bin=GWB2_Deltaproteobacteria_65_81 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good + rbh
homoserine dehydrogenase rbh
Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
04302015_37_scaffold_193_11
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8276..9472)
DNA (1197bp) protein (399aa)
PLP-dependent aminotransferase, putative aspartate aminotransferase (EC:2.6.1.- 2.6.1.1) rbh
Putative PLP-dependent aminotransferase, putative aspartate aminotransferase id=1814823 bin=GWB2_Deltaproteobacteria_65_81 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good + rbh
Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
04302015_37_scaffold_193_12
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9614..9919
DNA (306bp) protein (102aa)
Putative uncharacterized protein id=1915210 bin=GWB2_Deltaproteobacteria_65_81 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=GWA2_Deltaproteobacteria_65_63_curated
04302015_37_scaffold_193_13
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9963..10949)
DNA (987bp) protein (329aa)
auxin-induced protein PCNT115 id=14623945 bin=bin5_DeltaP species=Paenibacillus mucilaginosus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin5_DeltaP organism_group=Deltaproteobacteria rbh
aldo/keto reductase rbh
Tax=CSP1_8_Deltaproteobacteria
04302015_37_scaffold_193_14
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11055..11393)
DNA (339bp) protein (113aa)
id=4881949 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
04302015_37_scaffold_193_15
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11473..13557)
DNA (2085bp) protein (695aa)
ATP-dependent DNA helicase RecG id=3346766 bin=GWC2_Deltaproteobacteria_66_88 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria rbh
ATP-dependent DNA helicase RecG
Tax=CG_Delta_02
04302015_37_scaffold_193_16
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13583..14977)
DNA (1395bp) protein (465aa)
Carbamoyl-phosphate synthase large chain id=4430762 bin=GWA2_Deltaproteo_65_63 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
carB; carbamyl-phosphate synthase, large subunit lipoprotein, glutamine-dependent
Tax=GWA2_Deltaproteobacteria_65_63_curated
Displaying 16 items

View Taxonomy