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bjp_ig2157_scaffold_90

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_90_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..527
DNA (525bp) protein (175aa)
hypothetical protein id=5081591 bin=GWF1_Burkholderiales_GWF1_66_17 species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_90_2
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(819..1757)
DNA (939bp) protein (313aa)
parB-like partition protein; K03497 chromosome partitioning protein, ParB family Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
chromosome segregation DNA-binding protein; K03497 chromosome partitioning protein, ParB family id=5081590 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
parB-like partition protein
bjp_ig2157_scaffold_90_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1764..2318)
DNA (555bp) protein (185aa)
hypothetical protein; K07002 id=5081587 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein; K07002 Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_90_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2326..3096)
DNA (771bp) protein (257aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUR8_9BURK rbh
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:EIK92958.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydroge
cobyrinic acid ac-diamide synthase
bjp_ig2157_scaffold_90_5
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3182..3796)
DNA (615bp) protein (205aa)
lysine exporter protein LysE/YggA id=5081585 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
lysine exporter protein LysE/YggA
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_90_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3864..4559)
DNA (696bp) protein (232aa)
methyltransferase GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] id=5081584 bin=GWF1_Burkholderiales_GWF1_66_17 species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
methyltransferase GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] Tax=GWE1_Burkholderiales_65_30_curated
methyltransferase GidB
bjp_ig2157_scaffold_90_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4556..6529)
DNA (1974bp) protein (658aa)
glucose inhibited division protein A; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme Tax=GWE1_Burkholderiales_65_30_curated
glucose inhibited division protein A; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme id=5081583 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
glucose inhibited division protein A
bjp_ig2157_scaffold_90_8
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6676..6945
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YDP1_9BURK
regulator of competence-specific genes
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_90_9
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7105..7701
DNA (597bp) protein (199aa)
NADPH-dependent FMN reductase id=5081581 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
NADPH-dependent FMN reductase
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_90_10
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8043..8957)
DNA (915bp) protein (305aa)
Alpha/beta hydrolase fold protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47C05_DECAR
alpha/beta hydrolase
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_90_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9246..9812)
DNA (567bp) protein (189aa)
YceI family protein id=5081577 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_90_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9866..10438)
DNA (573bp) protein (191aa)
hypothetical protein id=5081576 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_90_13
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10480..11037)
DNA (558bp) protein (186aa)
cytochrome B561; K12262 cytochrome b561 id=5081575 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
cytochrome b/b6 domain-containing protein
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_90_14
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11171..11833
DNA (663bp) protein (221aa)
Transcriptional regulator, Crp/Fnr family id=1279002 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
CRP/FNR family transcriptional regulator
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_90_15
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11972..12163
DNA (192bp) protein (64aa)
Putative uncharacterized protein id=1279003 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_90_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12329..13492
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00035DEBA0 rbh
extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ADU36666.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.
bjp_ig2157_scaffold_90_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13530..14300
DNA (771bp) protein (257aa)
Class II aldolase/adducin-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUS5_9BURK rbh
Class II aldolase/adducin-like protein {ECO:0000313|EMBL:EIK92965.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hyd
class II aldolase/adducin-like protein
bjp_ig2157_scaffold_90_18
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14581..15339)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUS6_9BURK rbh
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Mn2+dependent serine/threonine protein kinase
bjp_ig2157_scaffold_90_19
unknown

Not on your lists

15434..15616
DNA (183bp) protein (61aa)

This feature has no annotations

bjp_ig2157_scaffold_90_20
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15529..16860)
DNA (1332bp) protein (444aa)
L-glutamine synthetase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2] id=5081571 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
L-glutamine synthetase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2] Tax=GWE1_Burkholderiales_65_30_curated
L-glutamine synthetase (EC:6.3.1.2)
bjp_ig2157_scaffold_90_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16922..18229)
DNA (1308bp) protein (436aa)
4-aminobutyrate aminotransferase (EC:2.6.1.19); K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=GWE1_Burkholderiales_65_30_curated
4-aminobutyrate aminotransferase (EC:2.6.1.19)
4-aminobutyrate aminotransferase id=1279006 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
bjp_ig2157_scaffold_90_22
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18395..19873)
DNA (1479bp) protein (493aa)
aldehyde dehydrogenase (EC:1.2.1.3); K09472 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase [EC:1.2.1.-] id=5081569 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
aldehyde dehydrogenase (EC:1.2.1.3)
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_90_23
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20190..21602
DNA (1413bp) protein (471aa)
RNA-directed DNA polymerase (Reverse transcriptase) n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3N0_VARPE rbh
RNA-directed DNA polymerase Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
RNA-directed DNA polymerase
bjp_ig2157_scaffold_90_24
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21610..21780)
DNA (171bp) protein (57aa)
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
bjp_ig2157_scaffold_90_25
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22031..22867)
DNA (837bp) protein (279aa)
binding-protein-dependent transport systems inner membrane component; K11074 putrescine transport system permease protein id=5081568 bin=GWF1_Burkholderiales_GWF1_66_17 species=Curvibacter putative symbiont of Hydra magnipapillata genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
binding-protein-dependent transport systems inner membrane component; K11074 putrescine transport system permease protein Tax=GWE1_Burkholderiales_65_30_curated
binding-protein-dependent transport system inner membrane protein
bjp_ig2157_scaffold_90_26
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22864..23784)
DNA (921bp) protein (307aa)
Putrescine transport system permease protein potH n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUT2_9BURK rbh
Putrescine transport system permease protein potH {ECO:0000313|EMBL:EIK92972.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;"
binding-protein-dependent transport system inner membrane protein
bjp_ig2157_scaffold_90_27
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23913..25007)
DNA (1095bp) protein (365aa)
spermidine/putrescine ABC transporter ATPase; K11076 putrescine transport system ATP-binding protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Spermidine/putrescine ABC transporter ATPase subunit id=1279010 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
spermidine/putrescine ABC transporter ATPase
bjp_ig2157_scaffold_90_28
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25094..26266)
DNA (1173bp) protein (391aa)
Putrescine-binding periplasmic protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUT4_9BURK rbh
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="H
extracellular solute-binding protein
bjp_ig2157_scaffold_90_29
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26503..27939)
DNA (1437bp) protein (479aa)
putative aminotransferase; K12256 putrescine aminotransferase [EC:2.6.1.-] Tax=GWE1_Burkholderiales_65_30_curated
Putative aminotransferase id=1279012 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
putative aminotransferase
bjp_ig2157_scaffold_90_30
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28057..29418)
DNA (1362bp) protein (454aa)
Glutamate--ammonia ligase {ECO:0000313|EMBL:EIK92976.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EIK92976.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
glutamate--ammonia ligase (EC:6.3.1.2)
Glutamate--ammonia ligase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUT6_9BURK rbh
Displaying items 1-30 of 91 in total

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