ggKbase home page

bjp_ig2157_scaffold_190

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_190_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

226..1038
DNA (813bp) protein (271aa)
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] id=5081381 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] Tax=GWE1_Burkholderial
birA; bifunctional Biotin operon transcriptional regulator/Biotin--[acetyl-CoA-carboxylase] synthetase
bjp_ig2157_scaffold_190_2
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1032..1781
DNA (750bp) protein (250aa)
sporulation domain-containing protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Uncharacterized protein id=1283756 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
sporulation domain-containing protein
bjp_ig2157_scaffold_190_3
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1981..2877)
DNA (897bp) protein (299aa)
Alpha/beta hydrolase-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MG25_9BURK rbh
alpha/beta hydrolase-like protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
alpha/beta hydrolase-like protein
bjp_ig2157_scaffold_190_4
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2874..3476)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MG26_9BURK
TetR family transcriptional regulator Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
TetR family transcriptional regulator
bjp_ig2157_scaffold_190_5
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3593..4591)
DNA (999bp) protein (333aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia
Glyceraldehyde-3-phosphate dehydrogenase, type n=4 Tax=Comamonas testosteroni RepID=D0IX67_COMT2 rbh
glyceraldehyde-3-phosphate dehydrogenase rbh
bjp_ig2157_scaffold_190_6
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4631..6715)
DNA (2085bp) protein (695aa)
transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1] id=5081377 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
transketolase
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_190_7
unknown

Not on your lists

comp(6808..7140)
DNA (333bp) protein (111aa)

This feature has no annotations

bjp_ig2157_scaffold_190_8
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7197..7931
DNA (735bp) protein (245aa)
nucleotidyl transferase id=5081376 bin=GWF1_Burkholderiales_GWF1_66_17 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
nucleotidyl transferase
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_190_9
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8056..9453
DNA (1398bp) protein (466aa)
aminopeptidase P (EC:3.4.11.9)
Peptidase m24 id=1283761 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_190_10
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9458..10033
DNA (576bp) protein (192aa)
MOSC domain containing protein id=1283762 bin=GWE1_Burkholderiales_65_30 species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
MOSC domain-containing protein
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_190_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10089..11057
DNA (969bp) protein (323aa)
ribokinase-like domain-containing protein; K00850 6-phosphofructokinase [EC:2.7.1.11] Tax=GWE1_Burkholderiales_65_30_curated
6-phosphofructokinase id=1283763 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
ribokinase-like domain-containing protein
bjp_ig2157_scaffold_190_12
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11256..13415
DNA (2160bp) protein (720aa)
Putative TonB-dependent receptor n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K8H3_AZOSB rbh
fpvA1; putative TonB-dependent receptor; K02014 iron complex outermembrane recepter protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
fpvA1; putative TonB-dependent receptor
bjp_ig2157_scaffold_190_13
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13523..15766
DNA (2244bp) protein (748aa)
Probable TonB-dependent receptor n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K9V5_AZOSB rbh
fpvA2; TonB-dependent receptor
Probable TonB-dependent receptor {ECO:0000313|EMBL:CAL95610.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (stra
bjp_ig2157_scaffold_190_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15985..17175
DNA (1191bp) protein (397aa)
iron-regulated protein A; K07231 putative iron-regulated protein id=5081371 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
iron-regulated protein A; K07231 putative iron-regulated protein Tax=GWE1_Burkholderiales_65_30_curated
putative iron-regulated protein
bjp_ig2157_scaffold_190_15
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17339..18832
DNA (1494bp) protein (498aa)
hypothetical protein id=5081370 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hylemonella gracilis genus=Hylemonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_190_16
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18871..19929
DNA (1059bp) protein (353aa)
periplasmic lipoprotein-like protein; K07338 hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
periplasmic lipoprotein-like protein; K07338 hypothetical protein id=5081369 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hylemonella gracilis genus=Hylemonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
peptidase M75, Imelysin
bjp_ig2157_scaffold_190_17
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19913..21067
DNA (1155bp) protein (385aa)
hypothetical protein; K09947 hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein; K09947 hypothetical protein id=5081368 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hylemonella gracilis genus=Hylemonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
bjp_ig2157_scaffold_190_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21114..21587)
DNA (474bp) protein (158aa)
hypothetical protein
id=5081367 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
id=5081367 Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_190_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21611..22456)
DNA (846bp) protein (282aa)
Hemin import ATP-binding protein HmuV {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041307}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041330};; TaxID=795665 speci
ABC transporter related protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MN09_9BURK rbh
ABC-type hemin transport system, ATPase component
bjp_ig2157_scaffold_190_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22576..23694)
DNA (1119bp) protein (373aa)
Transport system permease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MN10_9BURK rbh
Transport system permease {ECO:0000313|EMBL:EIK90600.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga s
ABC-type Fe3+-siderophore transport system, permease component
bjp_ig2157_scaffold_190_21
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23691..24185)
DNA (495bp) protein (165aa)
hypothetical protein id=1283770 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_190_22
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24220..25197)
DNA (978bp) protein (326aa)
Periplasmic binding protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MN11_9BURK rbh
Periplasmic binding protein {ECO:0000313|EMBL:EIK90601.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga
ABC-type hemin transport system, periplasmic component
bjp_ig2157_scaffold_190_23
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25335..26426)
DNA (1092bp) protein (364aa)
Hemin-degrading family protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MN12_9BURK rbh
Hemin-degrading family protein {ECO:0000313|EMBL:EIK90602.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenoph
putative heme degradation protein
bjp_ig2157_scaffold_190_24
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26464..26781)
DNA (318bp) protein (106aa)
Uncharacterized protein id=5081364 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_190_25
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26829..29051)
DNA (2223bp) protein (741aa)
Tonb-dependent hemoglobin/transferrin/lactoferrin family receptor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MN13_9BURK rbh
Tonb-dependent hemoglobin/transferrin/lactoferrin family receptor {ECO:0000313|EMBL:EIK90603.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hy
outer membrane receptor protein, mostly Fe transport
bjp_ig2157_scaffold_190_26
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29321..29791
DNA (471bp) protein (157aa)
bacterioferritin Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
bacterioferritin; K03594 bacterioferritin id=5081363 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
bacterioferritin
bjp_ig2157_scaffold_190_27
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29914..30153
DNA (240bp) protein (80aa)
hypothetical protein; K02192 bacterioferritin-associated ferredoxin Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
BFD/(2Fe-2S)-binding domain-containing protein id=1283776 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
bjp_ig2157_scaffold_190_28
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30411..32738
DNA (2328bp) protein (776aa)
malic enzyme (EC:1.1.1.40); K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Malic enzyme n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MG36_9BURK rbh
malic protein NAD-binding protein
bjp_ig2157_scaffold_190_29
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32949..33371
DNA (423bp) protein (141aa)
Guanine-specific ribonuclease N1 and T1 id=1283778 bin=GWE1_Burkholderiales_65_30 species=Verminephrobacter eiseniae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
guanine-specific ribonuclease N1 and T1
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_190_30
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33429..33971
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MG38_9BURK rbh
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein
Displaying items 1-30 of 45 in total

View Taxonomy