ggKbase home page

bjp_ig2157_scaffold_377

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_377_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..927
DNA (927bp) protein (309aa)
lysophospholipid transporter LplT id=5083595 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
lysophospholipid transporter LplT Tax=GWE1_Burkholderiales_65_30_curated
lysophospholipid transporter LplT
bjp_ig2157_scaffold_377_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1149..2264)
DNA (1116bp) protein (372aa)
response regulator receiver protein id=5083596 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
response regulator receiver protein Tax=GWE1_Burkholderiales_65_30_curated
response regulator receiver protein
bjp_ig2157_scaffold_377_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2436..2918
DNA (483bp) protein (161aa)
glutathione peroxidase (EC:1.11.1.9); K00432 glutathione peroxidase [EC:1.11.1.9] id=5083597 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
glutathione peroxidase (EC:1.11.1.9); K00432 glutathione peroxidase [EC:1.11.1.9] Tax=GWE1_Burkholderiales_65_30_curated
glutathione peroxidase (EC:1.11.1.9)
bjp_ig2157_scaffold_377_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2919..3677)
DNA (759bp) protein (253aa)
Putative effector of murein hydrolase id=1303843 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
putative effector of murein hydrolase Tax=GWE1_Burkholderiales_65_30_curated
putative effector of murein hydrolase
bjp_ig2157_scaffold_377_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3674..4039)
DNA (366bp) protein (122aa)
hypothetical protein id=5083599 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
LrgA family protein
bjp_ig2157_scaffold_377_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4058..4471)
DNA (414bp) protein (138aa)
hypothetical protein id=5083600 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_377_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4637..5866)
DNA (1230bp) protein (410aa)
glcF; glycolate oxidase iron-sulfur subunit; K11473 glycolate oxidase iron-sulfur subunit id=5083601 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
glcF; glycolate oxidase iron-sulfur subunit Tax=GWE1_Burkholderiales_65_30_curated
glcF; glycolate oxidase iron-sulfur subunit
bjp_ig2157_scaffold_377_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5872..7005)
DNA (1134bp) protein (378aa)
FAD linked oxidase domain-containing protein id=1303839 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
glcE; glycolate oxidase FAD-binding subunit; K11472 glycolate oxidase FAD binding subunit Tax=GWE1_Burkholderiales_65_30_curated
glcE; glycolate oxidase FAD-binding subunit
bjp_ig2157_scaffold_377_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7085..7342)
DNA (258bp) protein (86aa)
hypothetical protein id=5083603 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_377_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7507..8961)
DNA (1455bp) protein (485aa)
Ammonium transporter id=1303837 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
amtB; ammonium transporter; K03320 ammonium transporter, Amt family Tax=GWE1_Burkholderiales_65_30_curated
ammonia permease
bjp_ig2157_scaffold_377_11
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8992..9330)
DNA (339bp) protein (113aa)
nitrogen regulatory protein P-II; K04752 nitrogen regulatory protein P-II 2 id=5083605 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Nitrogen regulatory protein P-II 2 {ECO:0000313|EMBL:EWS62366.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrog
nitrogen regulatory protein P-II
bjp_ig2157_scaffold_377_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9727..9960
DNA (234bp) protein (78aa)
Mg chelatase-like protein; K07391 magnesium chelatase family protein id=5083606 bin=GWF1_Burkholderiales_GWF1_66_17 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Mg chelatase-like protein; K07391 magnesium chelatase family protein Tax=GWE1_Burkholderiales_65_30_curated
Mg chelatase-like protein
bjp_ig2157_scaffold_377_13
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10512..10799)
DNA (288bp) protein (96aa)
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_377_14
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11037..13811)
DNA (2775bp) protein (925aa)
hypothetical protein n=1 Tax=Pseudomonas mendocina RepID=UPI00037D3E74 rbh
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:EWS66601.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hy
DNA methyltransferase
bjp_ig2157_scaffold_377_15
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14416..15993)
DNA (1578bp) protein (526aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SIT9_STRM5 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO25280.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
hypothetical protein
bjp_ig2157_scaffold_377_16
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15990..17828)
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SIT8_STRM5 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJA12348.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
bjp_ig2157_scaffold_377_17
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17915..18385)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00038218F9
nuclease
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_377_18
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18658..18909)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q120K0_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE47042.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (stra
bjp_ig2157_scaffold_377_19
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19358..20683)
DNA (1326bp) protein (442aa)
umuC protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036D48F0 rbh
DNA polymerase V subunit UmuC {ECO:0000313|EMBL:EWS66389.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenoph
UMUC-like DNA-repair protein
bjp_ig2157_scaffold_377_20
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20712..21152)
DNA (441bp) protein (147aa)
LexA repressor {ECO:0000313|EMBL:EWS66390.1}; EC=3.4.21.88 {ECO:0000313|EMBL:EWS66390.1};; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydroge
DNA polymerase V n=1 Tax=Curvibacter lanceolatus RepID=UPI00036C9F2D
putative prophage repressor
bjp_ig2157_scaffold_377_21
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21198..21869
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D090_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EWS66391.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp
hypothetical protein
bjp_ig2157_scaffold_377_22
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21906..22277)
DNA (372bp) protein (124aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS66644.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp
bjp_ig2157_scaffold_377_23
unknown

Not on your lists

comp(22362..22868)
DNA (507bp) protein (169aa)

This feature has no annotations

bjp_ig2157_scaffold_377_24
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22922..24913
DNA (1992bp) protein (664aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BQW8_PSEFL rbh
Uncharacterized protein {ECO:0000313|EMBL:KFE67446.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
hypothetical protein
bjp_ig2157_scaffold_377_25
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25177..26001
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2P710_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGG90987.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Ps
hypothetical protein
bjp_ig2157_scaffold_377_26
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27327..28163
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003B6A473 rbh
Uncharacterized protein {ECO:0000313|EMBL:EGI75813.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis
putative uncharacterized protein rbh
bjp_ig2157_scaffold_377_27
Vibrio cholerae, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28180..29160
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI00039AA20B rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFE29330.1}; TaxID=666 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio cholerae.;"
bjp_ig2157_scaffold_377_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29198..29776
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WF89_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD38418.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
Displaying 28 items

View Taxonomy