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bjp_ig2157_scaffold_431

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_431_1
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(297..1814)
DNA (1518bp) protein (506aa)
ABC-type sugar transport system, ATPase component n=1 Tax=Acidovorax sp. CF316 RepID=J0KGB9_9BURK rbh
monosaccharide-transporting ATPase
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_431_2
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1915..2982)
DNA (1068bp) protein (356aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Acidovorax radicis RepID=UPI0002375F3D rbh
sugar ABC transporter substrate-binding protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
sugar ABC transporter substrate-binding protein
bjp_ig2157_scaffold_431_3
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3065..4030)
DNA (966bp) protein (322aa)
LacI family transcription regulator n=1 Tax=Acidovorax radicis RepID=UPI0002375F3E rbh
periplasmic binding protein/LacI transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
periplasmic binding protein/LacI transcriptional regulator
bjp_ig2157_scaffold_431_4
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4077..5528)
DNA (1452bp) protein (484aa)
aldehyde dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI0002375F3F rbh
aldehyde dehydrogenase Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
aldehyde dehydrogenase
bjp_ig2157_scaffold_431_5
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5663..6622
DNA (960bp) protein (320aa)
Transcriptional regulator n=1 Tax=Acidovorax sp. CF316 RepID=J1EDC7_9BURK rbh
LysR family transcriptional regulator
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_431_6
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6897..7706)
DNA (810bp) protein (270aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KW39_9BURK rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EGI76035.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylem
short-chain dehydrogenase/reductase SDR
bjp_ig2157_scaffold_431_7
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7817..8776
DNA (960bp) protein (320aa)
Gluconolactonase n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KW40_9BURK rbh
SMP-30/Gluconolaconase/LRE-like region-containing protein
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_431_8
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8946..9875
DNA (930bp) protein (310aa)
Galactose mutarotase-like enzyme n=1 Tax=Acidovorax sp. CF316 RepID=J1ED07_9BURK rbh
aldose 1-epimerase Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
aldose 1-epimerase
bjp_ig2157_scaffold_431_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9948..10337)
DNA (390bp) protein (130aa)
id=5082824 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
id=5082824 Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_431_10
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10495..11475)
DNA (981bp) protein (327aa)
LysR family transcriptional regulator Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Transcriptional regulator id=1287805 bin=GWE1_Burkholderiales_65_30 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
LysR family transcriptional regulator
bjp_ig2157_scaffold_431_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11621..13129
DNA (1509bp) protein (503aa)
methylmalonate-semialdehyde dehydrogenase; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] Tax=GWE1_Burkholderiales_65_30_cu
Methylmalonate semialdehyde dehydrogenase id=1287806 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
methylmalonate-semialdehyde dehydrogenase
bjp_ig2157_scaffold_431_12
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13309..14205)
DNA (897bp) protein (299aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Pseudomonas sp. GM41(2012) RepID=J2ZD70_9PSED rbh
Beta-lactamase {ECO:0000313|EMBL:KJZ63330.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
Beta-lactamase
bjp_ig2157_scaffold_431_13
unknown

Not on your lists

14575..14709
DNA (135bp) protein (45aa)

This feature has no annotations

bjp_ig2157_scaffold_431_14
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14865..15500
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y528_RAMTT
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein
bjp_ig2157_scaffold_431_15
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15811..16221
DNA (411bp) protein (137aa)
Glutathione-dependent formaldehyde-activating GFA n=1 Tax=Methylomonas methanica (strain MC09) RepID=F9ZXU9_METMM
glutathione-dependent formaldehyde-activating GFA
Glutathione-dependent formaldehyde-activating GFA {ECO:0000313|EMBL:AEF98528.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;"
bjp_ig2157_scaffold_431_16
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16388..17428
DNA (1041bp) protein (347aa)
aldo/keto reductase Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
aldo/keto reductase id=5082956 bin=GWF1_Burkholderiales_GWF1_66_17 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
aldo/keto reductase
bjp_ig2157_scaffold_431_17
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17633..18598)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00030449C5 rbh
Thioredoxin {ECO:0000313|EMBL:KJA10147.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
thioredoxin domain-containing protein rbh
bjp_ig2157_scaffold_431_18
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18739..19227
DNA (489bp) protein (163aa)
phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase id=1274631 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
bjp_ig2157_scaffold_431_19
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19232..20464
DNA (1233bp) protein (411aa)
phosphoribosylaminoimidazole carboxylase ATPase (EC:4.1.1.21)
Phosphoribosylaminoimidazole carboxylase ATPase id=1274630 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_431_20
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20518..21531
DNA (1014bp) protein (338aa)
translation factor SUA5; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Sua5/ycio/yrdc/ywlc family protein id=1274629 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
putative translation factor SUA5
bjp_ig2157_scaffold_431_21
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21688..21957)
DNA (270bp) protein (90aa)
PQ loop repeat protein {ECO:0000313|EMBL:EWS62577.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hypothetical protein; K15383 MtN3 and saliva related transmembrane protein id=5082951 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
bjp_ig2157_scaffold_431_22
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22094..23581)
DNA (1488bp) protein (496aa)
D-alanyl-D-alanine carboxypeptidase PBP3; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] id=5082949 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase (EC:3.4.16.4)
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_431_23
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23794..24663
DNA (870bp) protein (290aa)
peptidase M22, glycoprotease; K14742 hypothetical protease [EC:3.4.-.-] id=5082948 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
peptidase M22, glycoprotease; K14742 hypothetical protease [EC:3.4.-.-] Tax=GWE1_Burkholderiales_65_30_curated
peptidase M22, glycoprotease
bjp_ig2157_scaffold_431_24
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


24670..25275
DNA (606bp) protein (202aa)
30S ribosomal protein S18 (EC:2.3.1.-)
30S ribosomal protein S18 id=1274624 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_431_25
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25272..26198
DNA (927bp) protein (309aa)
DNA polymerase-like protein (EC:2.7.7.7); K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=GWE1_Burkholderiales_65_30_curated
DNA polymerase-like protein id=1274623 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
phage SPO1 DNA polymerase-like protein
Displaying 25 items

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