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bjp_ig2157_scaffold_443

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_443_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..693
DNA (693bp) protein (231aa)
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein id=5082327 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
taurine-transporting ATPase Tax=GWE1_Burkholderiales_65_30_curated
taurine-transporting ATPase
bjp_ig2157_scaffold_443_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

840..1601
DNA (762bp) protein (254aa)
Binding-protein-dependent transport systems inner membrane component id=1268790 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
putative ABC transporter, permease protein Tax=GWE1_Burkholderiales_65_30_curated
putative ABC transporter, permease protein
bjp_ig2157_scaffold_443_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1598..2074
DNA (477bp) protein (159aa)
CMP/dCMP deaminase zinc-binding protein id=1268791 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
zinc-binding CMP/dCMP deaminase protein Tax=GWE1_Burkholderiales_65_30_curated
zinc-binding CMP/dCMP deaminase protein
bjp_ig2157_scaffold_443_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2265..3251)
DNA (987bp) protein (329aa)
2OG-Fe(II) oxygenase; Flavanone 3-dioxygenase / Isopenicillin-N synthase (EC:1.14.11.9 1.21.3.1) id=5082330 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hylemonella gracilis genus=Hylemonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
2OG-Fe(II) oxygenase; Flavanone 3-dioxygenase / Isopenicillin-N synthase (EC:1.14.11.9 1.21.3.1) Tax=GWE1_Burkholderiales_65_30_curated
2OG-Fe(II) oxygenase; Flavanone 3-dioxygenase / Isopenicillin-N synthase (EC:1.14.11.9 1.21.3.1)
bjp_ig2157_scaffold_443_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3611..4642
DNA (1032bp) protein (344aa)
Nmt1/thi5 like domain-containing protein id=1268793 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
nmt1/thi5 like domain-containing protein Tax=GWE1_Burkholderiales_65_30_curated
nmt1/thi5 like domain-containing protein
bjp_ig2157_scaffold_443_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4639..5136
DNA (498bp) protein (166aa)
Cmp/dcmp deaminase zinc-binding protein id=1268794 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
zinc-binding CMP/dCMP deaminase protein Tax=GWE1_Burkholderiales_65_30_curated
zinc-binding CMP/dCMP deaminase protein
bjp_ig2157_scaffold_443_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5175..6005
DNA (831bp) protein (277aa)
urease accessory protein UreD; K03190 urease accessory protein id=5082333 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
urease accessory protein UreD; K03190 urease accessory protein Tax=GWE1_Burkholderiales_65_30_curated
urease accessory protein UreD
bjp_ig2157_scaffold_443_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6115..7806
DNA (1692bp) protein (564aa)
response regulator receiver domain-containing protein id=5082334 bin=GWF1_Burkholderiales_GWF1_66_17 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
response regulator receiver domain-containing protein Tax=GWE1_Burkholderiales_65_30_curated
response regulator receiver domain-containing protein
bjp_ig2157_scaffold_443_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7938..8636)
DNA (699bp) protein (233aa)
ABC transporter-like protein id=1268797 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
ABC transporter-like protein Tax=GWE1_Burkholderiales_65_30_curated
ABC transporter-like protein
bjp_ig2157_scaffold_443_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8716..9591)
DNA (876bp) protein (292aa)
urea ABC transporter ATP-binding protein urtd; K01995 branched-chain amino acid transport system ATP-binding protein id=5082336 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
ABC transporter-like protein Tax=GWE1_Burkholderiales_65_30_curated
ABC transporter-like protein
bjp_ig2157_scaffold_443_11
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9588..10727)
DNA (1140bp) protein (380aa)
Urea ABC transporter, permease protein UrtC id=1268799 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
inner-membrane translocator
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_443_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10724..12349)
DNA (1626bp) protein (542aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein id=5082338 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=GWE1_Burkholderiales_65_30_curated
inner-membrane translocator
bjp_ig2157_scaffold_443_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12492..13757)
DNA (1266bp) protein (422aa)
branched-chain amino acid ABC transporter periplasmic amino acid-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein id=5082339 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
branched-chain amino acid ABC transporter periplasmic amino acid-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWE1_Burkholderiales_65_30_curated
branched-chain amino acid ABC transporter periplasmic amino acid-binding protein
bjp_ig2157_scaffold_443_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13915..14952)
DNA (1038bp) protein (346aa)
response regulator receiver protein id=5082340 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
response regulator receiver protein Tax=GWE1_Burkholderiales_65_30_curated
response regulator receiver protein
bjp_ig2157_scaffold_443_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14949..18635)
DNA (3687bp) protein (1229aa)
histidine kinase id=5082341 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
integral membrane sensor hybrid histidine kinase Tax=GWE1_Burkholderiales_65_30_curated
integral membrane sensor hybrid histidine kinase
bjp_ig2157_scaffold_443_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18727..19572
DNA (846bp) protein (282aa)
hypothetical protein id=5082342 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_443_17
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19628..19930
DNA (303bp) protein (101aa)
ureA; urease subunit gamma (EC:3.5.1.5) Tax=GWE1_Burkholderiales_65_30_curated
ureA; urease subunit gamma (EC:3.5.1.5)
Urease subunit gamma id=1268805 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
bjp_ig2157_scaffold_443_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20077..20241
DNA (165bp) protein (55aa)
id=5082344 bin=GWF1_Burkholderiales_GWF1_66_17 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
id=5082344 Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_443_19
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20251..20556
DNA (306bp) protein (102aa)
urease subunit beta (EC:3.5.1.5); K01429 urease subunit beta [EC:3.5.1.5] Tax=GWE1_Burkholderiales_65_30_curated
ureB; urease, subunit beta (EC:3.5.1.5)
Urease subunit beta id=1268807 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
bjp_ig2157_scaffold_443_20
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20670..22388
DNA (1719bp) protein (573aa)
urease subunit alpha (EC:3.5.1.5); K01428 urease subunit alpha [EC:3.5.1.5] Tax=GWE1_Burkholderiales_65_30_curated
urease subunit alpha (EC:3.5.1.5)
Urease subunit alpha id=1268808 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
bjp_ig2157_scaffold_443_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22410..22988
DNA (579bp) protein (193aa)
UreE urease accessory domain-containing protein; K03187 urease accessory protein id=5082347 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hylemonella gracilis genus=Hylemonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
UreE urease accessory domain-containing protein; K03187 urease accessory protein Tax=GWE1_Burkholderiales_65_30_curated
UreE urease accessory domain-containing protein
bjp_ig2157_scaffold_443_22
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22930..23697
DNA (768bp) protein (256aa)
ureF; urease accessory protein; K03188 urease accessory protein id=5082348 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
ureF; urease accessory protein; K03188 urease accessory protein Tax=GWE1_Burkholderiales_65_30_curated
ureF; urease accessory protein
bjp_ig2157_scaffold_443_23
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23748..24431
DNA (684bp) protein (228aa)
urease accessory protein UreG; K03189 urease accessory protein id=5082349 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
urease accessory protein UreG Tax=GWE1_Burkholderiales_65_30_curated
urease accessory protein UreG
bjp_ig2157_scaffold_443_trna_1
unknown

Not on your lists

24498..24588
DNA (91bp)
transferRNA
bjp_ig2157_scaffold_443_24
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24897..25856
DNA (960bp) protein (320aa)
RNA polymerase sigma-32 subunit RpoH; K03089 RNA polymerase sigma-32 factor id=5082350 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
RNA polymerase sigma-32 subunit RpoH; K03089 RNA polymerase sigma-32 factor Tax=GWE1_Burkholderiales_65_30_curated
RNA polymerase sigma-32 subunit RpoH
Displaying 25 items

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