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bjp_ig2157_scaffold_540

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_540_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..474
DNA (474bp) protein (158aa)
peptidase C26; K07010 putative glutamine amidotransferase id=5079749 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
peptidase C26; K07010 putative glutamine amidotransferase Tax=GWE1_Burkholderiales_65_30_curated
peptidase C26
bjp_ig2157_scaffold_540_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

471..1124
DNA (654bp) protein (218aa)
hypothetical protein id=5079750 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_540_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1084..3159
DNA (2076bp) protein (692aa)
Uncharacterized protein id=1262310 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
4Fe-4S ferredoxin Tax=GWE1_Burkholderiales_65_30_curated
4Fe-4S ferredoxin
bjp_ig2157_scaffold_540_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3297..3914
DNA (618bp) protein (206aa)
hypothetical protein id=5079752 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_540_5
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4559..4864)
DNA (306bp) protein (102aa)
Addiction module antidote protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0K2_9BURK
addiction module antidote protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
putative transcriptional regulator
bjp_ig2157_scaffold_540_6
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4861..5163)
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0K3_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL21834.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
Uncharacterized protein HI_1419
bjp_ig2157_scaffold_540_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5194..7329)
DNA (2136bp) protein (712aa)
histidine kinase id=5079753 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
histidine kinase Tax=GWE1_Burkholderiales_65_30_curated
histidine kinase
bjp_ig2157_scaffold_540_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7445..8830)
DNA (1386bp) protein (462aa)
response regulator NtrC id=5079754 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
response regulator NtrC Tax=GWE1_Burkholderiales_65_30_curated
response regulator NtrC
bjp_ig2157_scaffold_540_9
GWE1_Burkholderiales_65_30, GWE1_Burkholderiales_65_30, GWE1_Burkholderiales_65_30, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9150..9326
DNA (177bp) protein (59aa)
hypothetical protein id=1262314 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein id=1262314 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
bjp_ig2157_scaffold_540_10
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9323..9550
DNA (228bp) protein (76aa)
hypothetical protein id=5079755 bin=GWF1_Burkholderiales_GWF1_66_17 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_540_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9568..12534
DNA (2967bp) protein (989aa)
twin-arginine translocation pathway signal protein; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] id=5079756 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
twin-arginine translocation pathway signal protein; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=GWE1_Burkholderiales_65_30_curated
twin-arginine translocation pathway signal protein
bjp_ig2157_scaffold_540_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12544..13146
DNA (603bp) protein (201aa)
4fe-4S ferredoxin iron-sulfur-binding domain-containing protein id=1262317 bin=GWE1_Burkholderiales_65_30 species=Verminephrobacter aporrectodeae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
4Fe-4S ferredoxin; K00124 formate dehydrogenase, beta subunit Tax=GWE1_Burkholderiales_65_30_curated
4Fe-4S ferredoxin
bjp_ig2157_scaffold_540_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13143..13397
DNA (255bp) protein (85aa)
hypothetical protein id=5079758 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
lipoprotein Tax=GWE1_Burkholderiales_65_30_curated
lipoprotein
bjp_ig2157_scaffold_540_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13408..14634
DNA (1227bp) protein (409aa)
formate dehydrogenase subunit gamma; K00127 formate dehydrogenase, gamma subunit id=5079759 bin=GWF1_Burkholderiales_GWF1_66_17 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
putative formate dehydrogenase, subunit FdhC Tax=GWE1_Burkholderiales_65_30_curated
putative formate dehydrogenase, subunit FdhC
bjp_ig2157_scaffold_540_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14655..15008
DNA (354bp) protein (118aa)
Putative uncharacterized protein id=1262320 bin=GWE1_Burkholderiales_65_30 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_540_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15146..16075
DNA (930bp) protein (310aa)
Formate dehydrogenase subunit FdhD id=1262321 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
formate dehydrogenase subunit FdhD; K02379 FdhD protein Tax=GWE1_Burkholderiales_65_30_curated
formate dehydrogenase subunit FdhD
bjp_ig2157_scaffold_540_17
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15997..16182)
DNA (186bp) protein (62aa)
id=5079762 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
id=5079762 Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_540_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16199..16831
DNA (633bp) protein (211aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9); K00761 uracil phosphoribosyltransferase [EC:2.4.2.9] id=5079763 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
upp; uracil phosphoribosyltransferase (EC:2.4.2.9); K00761 uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=GWE1_Burkholderiales_65_30_curated
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
bjp_ig2157_scaffold_540_19
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17168..19711
DNA (2544bp) protein (848aa)
Uncharacterized protein id=1262324 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_540_20
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19717..20130
DNA (414bp) protein (138aa)
globin; K06886 hemoglobin id=5079765 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Truncated BHb {ECO:0000313|EMBL:EWS58572.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
globin
bjp_ig2157_scaffold_540_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20143..20661
DNA (519bp) protein (173aa)
aspartyl protease; K06985 aspartyl protease family protein id=5079766 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
aspartyl protease; K06985 aspartyl protease family protein Tax=GWE1_Burkholderiales_65_30_curated
aspartyl protease-like protein
bjp_ig2157_scaffold_540_22
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20668..21303)
DNA (636bp) protein (212aa)
smr protein/muts2 id=5079767 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
smr protein/muts2 Tax=GWE1_Burkholderiales_65_30_curated
smr protein/muts2
Displaying 22 items

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