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bjp_ig2157_scaffold_561

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_561_trna_1
unknown

Not on your lists

21..94
DNA (74bp)
transferRNA
bjp_ig2157_scaffold_561_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(192..584)
DNA (393bp) protein (131aa)
Endoribonuclease L-PSP id=1270781 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
endoribonuclease L-PSP Tax=GWE1_Burkholderiales_65_30_curated
endoribonuclease L-PSP
bjp_ig2157_scaffold_561_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(633..2285)
DNA (1653bp) protein (551aa)
2-aminobenzoate-CoA ligase; K08295 2-aminobenzoate-CoA ligase [EC:6.2.1.32] Tax=GWE1_Burkholderiales_65_30_curated
2-aminobenzoate-CoA ligase; K08295 2-aminobenzoate-CoA ligase [EC:6.2.1.32] id=5080685 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
2-aminobenzoate-CoA ligase
bjp_ig2157_scaffold_561_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2420..3622)
DNA (1203bp) protein (401aa)
acyl-CoA dehydrogenase domain-containing protein; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] id=5080684 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
acyl-CoA dehydrogenase domain-containing protein Tax=GWE1_Burkholderiales_65_30_curated
acyl-CoA dehydrogenase domain-containing protein
bjp_ig2157_scaffold_561_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3624..4448)
DNA (825bp) protein (275aa)
enoyl-CoA hydratase (EC:4.2.1.17) id=5080683 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
enoyl-CoA hydratase (EC:4.2.1.17) Tax=GWE1_Burkholderiales_65_30_curated
enoyl-CoA hydratase (EC:4.2.1.17)
bjp_ig2157_scaffold_561_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4594..5085)
DNA (492bp) protein (164aa)
MarR family transcriptional regulator id=5080682 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
MarR family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
MarR family transcriptional regulator
bjp_ig2157_scaffold_561_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5154..7544)
DNA (2391bp) protein (797aa)
salicylyl-CoA 5-hydroxylase; K09461 anthraniloyl-CoA monooxygenase [EC:1.14.13.40] Tax=GWE1_Burkholderiales_65_30_curated
salicylyl-CoA 5-hydroxylase; K09461 anthraniloyl-CoA monooxygenase [EC:1.14.13.40] id=5080681 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
salicylyl-CoA 5-hydroxylase
bjp_ig2157_scaffold_561_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7669..7995
DNA (327bp) protein (109aa)
hypothetical protein id=5080680 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_561_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8236..9255)
DNA (1020bp) protein (340aa)
hypothetical protein id=5080679 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_561_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9204..9623)
DNA (420bp) protein (140aa)
hypothetical protein id=5080678 bin=GWF1_Burkholderiales_GWF1_66_17 species=Oceanithermus profundus genus=Oceanithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_561_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9749..10732)
DNA (984bp) protein (328aa)
Uncharacterized protein id=1270772 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_561_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10849..12096)
DNA (1248bp) protein (416aa)
phenylacetate-coenzyme A ligase; K01912 phenylacetate-CoA ligase [EC:6.2.1.30] id=5080676 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
phenylacetate-CoA ligase Tax=GWE1_Burkholderiales_65_30_curated
phenylacetate-CoA ligase
bjp_ig2157_scaffold_561_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12222..13031)
DNA (810bp) protein (270aa)
ABC transporter related protein id=1270770 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWE1_Burkholderiales_65_30_curated
ABC transporter-like protein
bjp_ig2157_scaffold_561_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13253..14584)
DNA (1332bp) protein (444aa)
hypothetical protein; K01999 branched-chain amino acid transport system substrate-binding protein id=5080674 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
putative ABC transporter, substrate-binding protein Tax=GWE1_Burkholderiales_65_30_curated
putative ABC transporter, substrate-binding protein
bjp_ig2157_scaffold_561_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14729..15805)
DNA (1077bp) protein (359aa)
Putative uncharacterized protein id=1270768 bin=GWE1_Burkholderiales_65_30 species=Curvibacter putative symbiont of Hydra magnipapillata genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=GWE1_Burkholderiales_65_30_curated
inner-membrane translocator
bjp_ig2157_scaffold_561_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15817..16746)
DNA (930bp) protein (310aa)
Inner-membrane translocator id=1270767 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=GWE1_Burkholderiales_65_30_curated
inner-membrane translocator
bjp_ig2157_scaffold_561_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16763..17545)
DNA (783bp) protein (261aa)
ABC transporter id=1270766 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
sulfate-transporting ATPase Tax=GWE1_Burkholderiales_65_30_curated
sulfate-transporting ATPase
bjp_ig2157_scaffold_561_17
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17542..19488)
DNA (1947bp) protein (649aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=GWE1_Burkholderiales_65_30_curated
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] id=5080670 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
AMP-dependent synthetase and ligase
bjp_ig2157_scaffold_561_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19663..20403
DNA (741bp) protein (247aa)
Crp/FNR family transcriptional regulator id=1270764 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Crp/FNR family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
Crp/FNR family transcriptional regulator
bjp_ig2157_scaffold_561_19
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20448..20651
DNA (204bp) protein (68aa)
pseudouridine synthase Rsu; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] id=5080668 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
pseudouridine synthase Rsu; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] Tax=GWE1_Burkholderiales_65_30_curated
Displaying 20 items

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