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bjp_ig2157_scaffold_654

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_654_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..757
DNA (756bp) protein (252aa)
glycosyl transferase family protein id=5081472 bin=GWF1_Burkholderiales_GWF1_66_17 species=Massilia timonae genus=Massilia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
glycosyl transferase family protein Tax=GWE1_Burkholderiales_65_30_curated
glycosyl transferase family protein
bjp_ig2157_scaffold_654_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

747..1478
DNA (732bp) protein (244aa)
hypothetical protein id=5081473 bin=GWF1_Burkholderiales_GWF1_66_17 species=Massilia timonae genus=Massilia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_654_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1468..3243
DNA (1776bp) protein (592aa)
hypothetical protein id=5081474 bin=GWF1_Burkholderiales_GWF1_66_17 species=Massilia timonae genus=Massilia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
glycosyl transferase family 83
bjp_ig2157_scaffold_654_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3240..4253
DNA (1014bp) protein (338aa)
nucleotide sugar epimerase; K08679 UDP-glucuronate 4-epimerase [EC:5.1.3.6] Tax=GWE1_Burkholderiales_65_30_curated
Nucleotide sugar epimerase id=1283659 bin=GWE1_Burkholderiales_65_30 species=Aeromonas hydrophila genus=Aeromonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
nucleotide sugar epimerase
bjp_ig2157_scaffold_654_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4229..4981)
DNA (753bp) protein (251aa)
PAP2 superfamily protein id=5081476 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
PAP2 superfamily protein Tax=GWE1_Burkholderiales_65_30_curated
PAP2 superfamily protein
bjp_ig2157_scaffold_654_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5077..5808
DNA (732bp) protein (244aa)
Two component transcriptional regulator id=1283657 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator Tax=GWE1_Burkholderiales_65_30_curated
two component transcriptional regulator
bjp_ig2157_scaffold_654_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5805..7160
DNA (1356bp) protein (452aa)
histidine kinase id=5081478 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
histidine kinase Tax=GWE1_Burkholderiales_65_30_curated
histidine kinase
bjp_ig2157_scaffold_654_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7261..8994
DNA (1734bp) protein (578aa)
hypothetical protein; K03760 phosphoethanolamine transferase id=5081479 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
sulfatase Tax=GWE1_Burkholderiales_65_30_curated
sulfatase
bjp_ig2157_scaffold_654_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8972..10390)
DNA (1419bp) protein (473aa)
two-component sensor histidine kinase id=5081480 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
two-component sensor histidine kinase Tax=GWE1_Burkholderiales_65_30_curated
two-component sensor histidine kinase
bjp_ig2157_scaffold_654_10
Deinococcus radiodurans, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(10418..11683)
DNA (1266bp) protein (422aa)
transposase IS605 n=1 Tax=Nonomuraea coxensis RepID=UPI00036CAE18
transposase
Transposase, putative {ECO:0000313|EMBL:AAF09766.1}; TaxID=243230 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus radiodurans (str
bjp_ig2157_scaffold_654_11
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11680..12417)
DNA (738bp) protein (246aa)
ISSpo8, transposase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GN26_9PROT
Transposase {ECO:0000313|EMBL:GAN81173.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 =
ISSpo8, transposase
bjp_ig2157_scaffold_654_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12734..13408)
DNA (675bp) protein (225aa)
two component response regulator; K02483 two-component system, OmpR family, response regulator id=5081481 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
two component response regulator Tax=GWE1_Burkholderiales_65_30_curated
two component response regulator
bjp_ig2157_scaffold_654_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13414..13794)
DNA (381bp) protein (127aa)
peptidase propeptide and ypeb domain-containing protein id=5081482 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_654_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13925..14479
DNA (555bp) protein (185aa)
id=5081483 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
id=5081483 Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_654_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14493..15026
DNA (534bp) protein (178aa)
Mono-heme class I cytochrome c id=1283650 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
mono-heme class I cytochrome c Tax=GWE1_Burkholderiales_65_30_curated
mono-heme class I cytochrome c
bjp_ig2157_scaffold_654_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15053..15565
DNA (513bp) protein (171aa)
diheme cytochrome c id=5081485 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
diheme cytochrome c Tax=GWE1_Burkholderiales_65_30_curated
diheme cytochrome c
bjp_ig2157_scaffold_654_17
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15582..16358
DNA (777bp) protein (259aa)
Cytochrome B561 id=1283648 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
cytochrome B561 Tax=GWE1_Burkholderiales_65_30_curated
cytochrome B561
bjp_ig2157_scaffold_654_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16411..16575
DNA (165bp) protein (55aa)
rubredoxin reductase (EC:1.18.1.1) id=5081487 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Rubredoxin-NAD(+) reductase Tax=GWE1_Burkholderiales_65_30_curated
Rubredoxin-NAD(+) reductase
bjp_ig2157_scaffold_654_19
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16600..16959)
DNA (360bp) protein (120aa)
hypothetical protein id=5081488 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_654_20
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17152..17586
DNA (435bp) protein (145aa)
phosphoglycerate kinase; K00927 phosphoglycerate kinase [EC:2.7.2.3] id=5081489 bin=GWF1_Burkholderiales_GWF1_66_17 species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
phosphoglycerate kinase Tax=GWE1_Burkholderiales_65_30_curated
phosphoglycerate kinase
Displaying 20 items

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