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bjp_ig2157_scaffold_687

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_687_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..143)
DNA (141bp) protein (47aa)
id=5082232 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
id=5082232 Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_687_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

393..1661
DNA (1269bp) protein (423aa)
GTP cyclohydrolase II id=1268694 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
putative GTP cyclohydrolase II
bjp_ig2157_scaffold_687_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1724..2986
DNA (1263bp) protein (421aa)
hypothetical protein id=5082230 bin=GWF1_Burkholderiales_GWF1_66_17 species=Rhodococcus opacus genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_687_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3010..3639
DNA (630bp) protein (210aa)
upp; uracil phosphoribosyltransferase; K00761 uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=GWE1_Burkholderiales_65_30_curated
Uracil phosphoribosyltransferase id=1268692 bin=GWE1_Burkholderiales_65_30 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
upp; uracil phosphoribosyltransferase
bjp_ig2157_scaffold_687_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3701..4972
DNA (1272bp) protein (424aa)
codA; cytosine deaminase; K01485 cytosine deaminase [EC:3.5.4.1] Tax=GWE1_Burkholderiales_65_30_curated
Cytosine deaminase-like metal-dependent hydrolase id=1268691 bin=GWE1_Burkholderiales_65_30 species=Hylemonella gracilis genus=Hylemonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
codA; cytosine deaminase
bjp_ig2157_scaffold_687_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5102..5320
DNA (219bp) protein (73aa)
hypothetical protein; K09794 hypothetical protein id=5082227 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein; K09794 hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_687_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5462..6559
DNA (1098bp) protein (366aa)
Alcohol dehydrogenase zinc-binding domain protein id=1268689 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
alcohol dehydrogenase Tax=GWE1_Burkholderiales_65_30_curated
alcohol dehydrogenase
bjp_ig2157_scaffold_687_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6596..9016)
DNA (2421bp) protein (807aa)
xanthine dehydrogenase, molybdopterin-binding subunit (EC:1.17.3.2); K13482 xanthine dehydrogenase large subunit [EC:1.17.1.4] Tax=GWE1_Burkholderiales_65_30_curated
Xanthine dehydrogenase large subunit id=1268688 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase
bjp_ig2157_scaffold_687_9
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9013..10638)
DNA (1626bp) protein (542aa)
molybdopterin dehydrogenase; K13481 xanthine dehydrogenase small subunit [EC:1.17.1.4] id=5082224 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
molybdopterin dehydrogenase
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_687_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10721..11674
DNA (954bp) protein (318aa)
LysR family transcriptional regulator id=1268686 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
LysR family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
LysR family transcriptional regulator
bjp_ig2157_scaffold_687_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11694..13247
DNA (1554bp) protein (518aa)
monosaccharide-transporting ATPase (EC:3.6.3.17); K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] id=5082222 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
monosaccharide-transporting ATPase Tax=GWE1_Burkholderiales_65_30_curated
monosaccharide-transporting ATPase
bjp_ig2157_scaffold_687_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13234..14289
DNA (1056bp) protein (352aa)
inner-membrane translocator; K02057 simple sugar transport system permease protein id=5082221 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
inner-membrane translocator Tax=GWE1_Burkholderiales_65_30_curated
inner-membrane translocator
bjp_ig2157_scaffold_687_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14434..15354
DNA (921bp) protein (307aa)
inner-membrane translocator; K02057 simple sugar transport system permease protein id=5082220 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
inner-membrane translocator; K02057 simple sugar transport system permease protein Tax=GWE1_Burkholderiales_65_30_curated
inner-membrane translocator
bjp_ig2157_scaffold_687_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15415..16560
DNA (1146bp) protein (382aa)
Basic membrane lipoprotein id=1268682 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
basic membrane lipoprotein; K02058 simple sugar transport system substrate-binding protein Tax=GWE1_Burkholderiales_65_30_curated
basic membrane lipoprotein
Displaying 14 items

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