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bjp_ig2157_scaffold_711

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_711_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..245)
DNA (243bp) protein (81aa)
hypothetical protein id=5083798 bin=GWF1_Burkholderiales_GWF1_66_17 species=Tolumonas auensis genus=Tolumonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_711_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

488..1246
DNA (759bp) protein (253aa)
Transcriptional regulatory protein ompR id=1308715 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
ompR-2; response regulator Tax=GWE1_Burkholderiales_65_30_curated
ompR-2; response regulator
bjp_ig2157_scaffold_711_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1243..2541
DNA (1299bp) protein (433aa)
integral membrane sensor signal transduction histidine kinase; K07638 two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] id=5083800 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
envZ-2; signal transduction histidine kinase Tax=GWE1_Burkholderiales_65_30_curated
envZ-2; signal transduction histidine kinase
bjp_ig2157_scaffold_711_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2549..3673)
DNA (1125bp) protein (375aa)
ABC transporter-like protein; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30] Tax=GWE1_Burkholderiales_65_30_curated
ABC transporter-like protein id=1308717 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
ABC-type spermidine/putrescine transport systems, ATPase component
bjp_ig2157_scaffold_711_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3870..5477
DNA (1608bp) protein (536aa)
binding-protein-dependent transport systems inner membrane component; K02011 iron(III) transport system permease protein Tax=GWE1_Burkholderiales_65_30_curated
binding-protein-dependent transport systems inner membrane component; K02011 iron(III) transport system permease protein id=5083802 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
binding-protein-dependent transport system inner membrane protein
bjp_ig2157_scaffold_711_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5503..5925)
DNA (423bp) protein (141aa)
phnB1; PhnB protein; K04750 PhnB protein id=5083803 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
phnB1; PhnB protein; K04750 PhnB protein Tax=GWE1_Burkholderiales_65_30_curated
phnB1; PhnB protein
bjp_ig2157_scaffold_711_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6083..6625)
DNA (543bp) protein (181aa)
hypothetical protein id=5083804 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_711_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6662..8092)
DNA (1431bp) protein (477aa)
cardiolipin synthetase 2 (EC:2.7.8.-); K06131 cardiolipin synthase [EC:2.7.8.-] id=5083805 bin=GWF1_Burkholderiales_GWF1_66_17 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
cardiolipin synthetase 2 (EC:2.7.8.-); K06131 cardiolipin synthase [EC:2.7.8.-] Tax=GWE1_Burkholderiales_65_30_curated
cardiolipin synthetase 2 (EC:2.7.8.-)
bjp_ig2157_scaffold_711_trna_1
unknown

Not on your lists

comp(8149..8227)
DNA (79bp)
transferRNA
bjp_ig2157_scaffold_711_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8256..9191)
DNA (936bp) protein (312aa)
LysR family transcriptional regulator id=5083806 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
LysR family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
LysR family transcriptional regulator
bjp_ig2157_scaffold_711_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9325..9969
DNA (645bp) protein (215aa)
(acyl-carrier-protein) phosphodiesterase (EC:3.1.4.14); K01118 FMN-dependent NADH-azoreductase [EC:1.7.-.-] id=5083807 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
NAD(P)h dehydrogenase (quinone) Tax=GWE1_Burkholderiales_65_30_curated
NAD(P)h dehydrogenase (quinone)
bjp_ig2157_scaffold_711_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10009..14136)
DNA (4128bp) protein (1376aa)
hypothetical protein; K09800 hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein; K09800 hypothetical protein id=5083808 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein
bjp_ig2157_scaffold_711_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14142..16115)
DNA (1974bp) protein (658aa)
surface antigen (D15) Tax=GWE1_Burkholderiales_65_30_curated
surface antigen (D15) id=5083809 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
surface antigen (D15)
bjp_ig2157_scaffold_711_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16122..16235)
DNA (114bp) protein (38aa)
Uncharacterized protein id=1308726 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein; K09989 hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
von Willebrand factor A
Displaying 14 items

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