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bjp_ig2157_scaffold_859

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_859_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..932)
DNA (930bp) protein (310aa)
thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] id=5082789 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=GWE1_Burkholderiales_65_30_curated
thiamine-monophosphate kinase (EC:2.7.4.16)
bjp_ig2157_scaffold_859_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(929..3154)
DNA (2226bp) protein (742aa)
site-specific recombinase Gcr Tax=GWE1_Burkholderiales_65_30_curated
putative site-specific recombinase transmembrane protein id=5082788 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
site-specific recombinase Gcr
bjp_ig2157_scaffold_859_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3204..3614)
DNA (411bp) protein (137aa)
apaG; ApaG protein; K06195 ApaG protein id=5082787 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
apaG; ApaG protein; K06195 ApaG protein Tax=GWE1_Burkholderiales_65_30_curated
apaG; ApaG protein
bjp_ig2157_scaffold_859_4
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3691..4368
DNA (678bp) protein (226aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comam
Ribulose-phosphate 3-epimerase id=1274463 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
pentose-5-phosphate-3-epimerase
bjp_ig2157_scaffold_859_5
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4368..5063
DNA (696bp) protein (232aa)
Phosphoglycolate phosphatase id=1274462 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
phosphoglycolate phosphatase
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_859_6
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5184..5798)
DNA (615bp) protein (205aa)
Putative lipoprotein transmembrane id=1274459 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_859_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6216..7805
DNA (1590bp) protein (530aa)
anthranilate synthase component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] Tax=GWE1_Burkholderiales_65_30_curated
anthranilate synthase component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] id=5082781 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
anthranilate synthase component I (EC:4.1.3.27) rbh
bjp_ig2157_scaffold_859_8
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7811..8497
DNA (687bp) protein (229aa)
Anthranilate synthase component II id=1274457 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
anthranilate synthase component II
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_859_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8494..9567
DNA (1074bp) protein (358aa)
ltaE; low-specificity L-threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5] id=5082779 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
ltaE; low-specificity L-threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5] Tax=GWE1_Burkholderiales_65_30_curated
threonine aldolase (EC:4.1.2.5)
bjp_ig2157_scaffold_859_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9588..10238
DNA (651bp) protein (217aa)
Threonine efflux protein id=1274455 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
lysine exporter protein LysE/YggA Tax=GWE1_Burkholderiales_65_30_curated
lysine exporter protein LysE/YggA
bjp_ig2157_scaffold_859_11
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10254..11321
DNA (1068bp) protein (356aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1437444 sp
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18); K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18] id=5082777 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
bjp_ig2157_scaffold_859_12
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11330..11479
DNA (150bp) protein (50aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS64637.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp
id=5082776 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax ebreus genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
bjp_ig2157_scaffold_859_13
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11472..12272
DNA (801bp) protein (267aa)
indole-3-glycerol-phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] id=5082775 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
trpC; indole-3-glycerol phosphate synthase TrpC (EC:4.1.1.48)
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_859_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12283..13026
DNA (744bp) protein (248aa)
uracil-DNA glycosylase; K03648 uracil-DNA glycosylase [EC:3.2.2.27] Tax=GWE1_Burkholderiales_65_30_curated
Uracil-DNA glycosylase id=1274451 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
uracil-DNA glycosylase
bjp_ig2157_scaffold_859_trna_1
unknown

Not on your lists

13084..13166
DNA (83bp)
transferRNA
bjp_ig2157_scaffold_859_trna_2
unknown

Not on your lists

13252..13322
DNA (71bp)
transferRNA
bjp_ig2157_scaffold_859_trna_3
unknown

Not on your lists

13388..13459
DNA (72bp)
transferRNA
bjp_ig2157_scaffold_859_15
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13507..13695
DNA (189bp) protein (63aa)
Elongation factor Tu n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y7H0_LEPCP
tuf; Elongation factor Tu (EF-Tu) (P-43)
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteri
Displaying 18 items

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