ggKbase home page

bjp_ig2157_scaffold_950

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_950_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..755
DNA (753bp) protein (251aa)
TRAP transporter solute receptor Tax=GWE1_Burkholderiales_65_30_curated
TRAP transporter solute receptor id=5079363 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
TRAP transporter solute receptor
bjp_ig2157_scaffold_950_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1072..2112
DNA (1041bp) protein (347aa)
TRAP dicarboxylate transporter, DctP subunit id=1261923 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
TRAP transporter solute receptor Tax=GWE1_Burkholderiales_65_30_curated
TRAP-type C4-dicarboxylate transport system, periplasmic component
bjp_ig2157_scaffold_950_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2336..2857
DNA (522bp) protein (174aa)
hypothetical protein id=5079365 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_950_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2863..4179
DNA (1317bp) protein (439aa)
TRAP dicarboxylate transporter, permease component id=1261925 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
TRAP dicarboxylate transporter subunit DctM Tax=GWE1_Burkholderiales_65_30_curated
dctM; TRAP-type C4-dicarboxylate transport system, large permease component
bjp_ig2157_scaffold_950_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4297..5286
DNA (990bp) protein (330aa)
TctC id=5079367 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
TctC Tax=GWE1_Burkholderiales_65_30_curated
TctC
bjp_ig2157_scaffold_950_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5417..6322
DNA (906bp) protein (302aa)
hypothetical protein id=5079368 bin=GWF1_Burkholderiales_GWF1_66_17 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_950_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6338..7288
DNA (951bp) protein (317aa)
auxin efflux carrier; K07088 id=5079369 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
auxin efflux carrier; K07088 Tax=GWE1_Burkholderiales_65_30_curated
auxin efflux carrier
bjp_ig2157_scaffold_950_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7418..8326)
DNA (909bp) protein (303aa)
LysR family transcriptional regulator id=5079370 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
LysR family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
LysR family transcriptional regulator
bjp_ig2157_scaffold_950_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8483..9529
DNA (1047bp) protein (349aa)
fldW; 4-oxalomesaconate hydratase (EC:4.1.1.45); K10220 4-oxalmesaconate hydratase [EC:4.2.1.83] Tax=GWE1_Burkholderiales_65_30_curated
fldW; 4-oxalomesaconate hydratase (EC:4.1.1.45)
Amidohydrolase 2 id=1261930 bin=GWE1_Burkholderiales_65_30 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
bjp_ig2157_scaffold_950_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9643..10326
DNA (684bp) protein (228aa)
4-carboxy-4-hydroxy-2-oxoadipate aldolase; K10218 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] id=5079372 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
4-carboxy-4-hydroxy-2-oxoadipate aldolase; K10218 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] Tax=GWE1_Burkholderiales_65_30_curated
4-carboxy-4-hydroxy-2-oxoadipate aldolase
bjp_ig2157_scaffold_950_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10337..11269
DNA (933bp) protein (311aa)
amidohydrolase 2; K10221 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57] id=5079373 bin=GWF1_Burkholderiales_GWF1_66_17 species=Curvibacter putative symbiont of Hydra magnipapillata genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
amidohydrolase 2; K10221 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57] Tax=GWE1_Burkholderiales_65_30_curated
amidohydrolase 2
bjp_ig2157_scaffold_950_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11369..11806
DNA (438bp) protein (146aa)
ligA2; protocatechuate 4,5-dioxygenase subunit alpha (EC:1.13.11.8); K04100 protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] id=5079374 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
ligA2; protocatechuate 4,5-dioxygenase subunit alpha (EC:1.13.11.8); K04100 protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] Tax=GWE1_Burkholderiales_65_30_curated
ligA2; protocatechuate 4,5-dioxygenase subunit alpha (EC:1.13.11.8)
bjp_ig2157_scaffold_950_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11809..12489
DNA (681bp) protein (227aa)
protocatechuate 4,5-dioxygenase subunit beta; K04101 protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] id=5079375 bin=GWF1_Burkholderiales_GWF1_66_17 species=Curvibacter putative symbiont of Hydra magnipapillata genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
protocatechuate 4,5-dioxygenase subunit beta Tax=GWE1_Burkholderiales_65_30_curated
protocatechuate 4,5-dioxygenase subunit beta
Displaying 13 items

View Taxonomy