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bjp_ig2157_scaffold_999

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_999_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..106
DNA (105bp) protein (35aa)
Uncharacterized protein id=1274891 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
chromosome partitioning protein ParA Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_999_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(187..1917)
DNA (1731bp) protein (577aa)
Type I secretion outer membrane protein TolC; K12538 outer membrane protein HasF Tax=GWE1_Burkholderiales_65_30_curated
Type I secretion outer membrane protein, TolC id=1274892 bin=GWE1_Burkholderiales_65_30 species=Nitrosospira multiformis genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Type I secretion outer membrane protein TolC
bjp_ig2157_scaffold_999_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1923..3269)
DNA (1347bp) protein (449aa)
Type I secretion membrane fusion protein HlyD; K12537 protease secretion protein HasE id=5082644 bin=GWF1_Burkholderiales_GWF1_66_17 species=Nitrosospira multiformis genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
Type I secretion membrane fusion protein HlyD; K12537 protease secretion protein HasE Tax=GWE1_Burkholderiales_65_30_curated
Type I secretion membrane fusion protein HlyD
bjp_ig2157_scaffold_999_4
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3312..5264)
DNA (1953bp) protein (651aa)
Type I secretion system ATPase, PrtD id=1274894 bin=GWE1_Burkholderiales_65_30 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Type I secretion system ATPase PrtD
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_999_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5388..5831
DNA (444bp) protein (148aa)
hypothetical protein id=5082646 bin=GWF1_Burkholderiales_GWF1_66_17 species=Pseudoalteromonas haloplanktis genus=Pseudoalteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_999_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5825..6961)
DNA (1137bp) protein (379aa)
extracellular ligand binding protein id=5082647 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
extracellular ligand binding protein Tax=GWE1_Burkholderiales_65_30_curated
extracellular ligand binding protein
bjp_ig2157_scaffold_999_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7095..8675)
DNA (1581bp) protein (527aa)
benzoate-CoA ligase (EC:6.2.1.25) Tax=GWE1_Burkholderiales_65_30_curated
benzoate-CoA ligase family; K04110 benzoate-CoA ligase [EC:6.2.1.25] id=5082648 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
benzoate-CoA ligase (EC:6.2.1.25)
bjp_ig2157_scaffold_999_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8710..10287)
DNA (1578bp) protein (526aa)
aldehyde dehydrogenase; K15514 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase [EC:1.2.1.77] Tax=GWE1_Burkholderiales_65_30_curated
Aldehyde dehydrogenase id=1274898 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
aldehyde dehydrogenase
bjp_ig2157_scaffold_999_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10442..11383
DNA (942bp) protein (314aa)
anaerobic benzoate catabolism transcriptional regulator (EC:2.7.1.71); K15546 XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator id=5082650 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
anaerobic benzoate catabolism transcriptional regulator (EC:2.7.1.71); K15546 XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator Tax=GWE1_Burkholderi
anaerobic benzoate catabolism transcriptional regulator (EC:2.7.1.71)
bjp_ig2157_scaffold_999_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11522..12013
DNA (492bp) protein (164aa)
benzoyl-CoA-dihydrodiol lyase (EC:4.2.1.17) Tax=GWE1_Burkholderiales_65_30_curated
Benzoyl-CoA-dihydrodiol lyase id=1275355 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
benzoyL-CoA-dihydrodiol lyase
Displaying 10 items

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