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bjp_ig2157_scaffold_2270

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_2270_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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221..1246
DNA (1026bp) protein (342aa)
spermidine/putrescine ABC transporter ATPase; K02052 putative spermidine/putrescine transport system ATP-binding protein id=5083744 bin=GWF1_Burkholderiales_GWF1_66_17 species=Pseudomonas pseudoalcaligenes genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
putative polyamine ABC transporter ATP-binding protein Tax=GWE1_Burkholderiales_65_30_curated
putative polyamine ABC transporter ATP-binding protein
bjp_ig2157_scaffold_2270_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1254..2156
DNA (903bp) protein (301aa)
binding-protein-dependent transport systems inner membrane component; K02054 putative spermidine/putrescine transport system permease protein id=5083743 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
binding-protein-dependent transport systems inner membrane component; K02054 putative spermidine/putrescine transport system permease protein Tax=GWE1_Burkholderiales_65_30_curated
binding-protein-dependent transport systems inner membrane component
bjp_ig2157_scaffold_2270_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2146..2943
DNA (798bp) protein (266aa)
ABC transporter permease; K02053 putative spermidine/putrescine transport system permease protein id=5083742 bin=GWF1_Burkholderiales_GWF1_66_17 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
ABC transporter permease; K02053 putative spermidine/putrescine transport system permease protein Tax=GWE1_Burkholderiales_65_30_curated
ABC transporter permease
bjp_ig2157_scaffold_2270_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2993..4432
DNA (1440bp) protein (480aa)
Aminobutyraldehyde dehydrogenase (EC:1.2.1.19); K00137 aminobutyraldehyde dehydrogenase [EC:1.2.1.19] id=5083741 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
Aminobutyraldehyde dehydrogenase (EC:1.2.1.19); K00137 aminobutyraldehyde dehydrogenase [EC:1.2.1.19] Tax=GWE1_Burkholderiales_65_30_curated
Aminobutyraldehyde dehydrogenase (EC:1.2.1.19)
bjp_ig2157_scaffold_2270_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4396..4614)
DNA (219bp) protein (73aa)
id=5083740 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
id=5083740 Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_2270_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4649..6052)
DNA (1404bp) protein (468aa)
Transcriptional regulator, GntR family id=1266580 bin=GWE1_Burkholderiales_65_30 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
GntR family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
GntR family transcriptional regulator
bjp_ig2157_scaffold_2270_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6198..6455
DNA (258bp) protein (86aa)
4-aminobutyrate aminotransferase; K07250 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22] Tax=GWE1_Burkholderiales_65_30_curated
4-aminobutyrate aminotransferase id=1266581 bin=GWE1_Burkholderiales_65_30 species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
4-aminobutyrate aminotransferase
Displaying 7 items

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