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bjp_ig2157_scaffold_1033

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_1033_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1069
DNA (1068bp) protein (356aa)
sigma-54 (RpoN); K03092 RNA polymerase sigma-54 factor id=5082805 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
sigma-54 (RpoN); K03092 RNA polymerase sigma-54 factor Tax=GWE1_Burkholderiales_65_30_curated
sigma-54 (RpoN)
bjp_ig2157_scaffold_1033_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1197..2531
DNA (1335bp) protein (445aa)
Putative RNA methylase id=1274481 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
RNA methylase Tax=GWE1_Burkholderiales_65_30_curated
RNA methylase
bjp_ig2157_scaffold_1033_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2528..2983
DNA (456bp) protein (152aa)
hypothetical protein id=5082803 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
PilT domain-containing protein Tax=GWE1_Burkholderiales_65_30_curated
PilT domain-containing protein
bjp_ig2157_scaffold_1033_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2980..3372
DNA (393bp) protein (131aa)
Glutaredoxin family protein id=1274479 bin=GWE1_Burkholderiales_65_30 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
glutaredoxin family protein Tax=GWE1_Burkholderiales_65_30_curated
glutaredoxin family protein
bjp_ig2157_scaffold_1033_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3382..3627)
DNA (246bp) protein (82aa)
Putative uncharacterized protein id=1274478 bin=GWE1_Burkholderiales_65_30 species=uncultured organism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_1033_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3650..4111)
DNA (462bp) protein (154aa)
HxlR family transcriptional regulator id=5082800 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
HxlR family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
HxlR family transcriptional regulator
bjp_ig2157_scaffold_1033_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4200..5054
DNA (855bp) protein (285aa)
NmrA family protein id=5082799 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
NmrA family protein Tax=GWE1_Burkholderiales_65_30_curated
NmrA family protein
bjp_ig2157_scaffold_1033_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5174..5425
DNA (252bp) protein (84aa)
hypothetical protein; K01561 haloacetate dehalogenase [EC:3.8.1.3] id=5082798 bin=GWF1_Burkholderiales_GWF1_66_17 species=Nostoc sp. genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein; K01561 haloacetate dehalogenase [EC:3.8.1.3] Tax=GWE1_Burkholderiales_65_30_curated
alpha/beta hydrolase
bjp_ig2157_scaffold_1033_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5422..5514
DNA (93bp) protein (31aa)
id=5082797 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
id=5082797 Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_1033_10
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5618..6424
DNA (807bp) protein (269aa)
Preprotein translocase subunit SecA {ECO:0000313|EMBL:EWS63422.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydro
YecA; K07039 uncharacterized protein id=5082796 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
sec-c motif domain-containing protein
bjp_ig2157_scaffold_1033_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6576..7061)
DNA (486bp) protein (162aa)
id=5082795 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
id=5082795 Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_1033_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7249..8394)
DNA (1146bp) protein (382aa)
hypothetical protein id=5082794 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_1033_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8406..9293)
DNA (888bp) protein (296aa)
LysR family transcriptional regulator id=5082793 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
LysR family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
LysR family transcriptional regulator
bjp_ig2157_scaffold_1033_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9412..10575
DNA (1164bp) protein (388aa)
twiN-arginine translocation pathway signal sequence domain-containing protein id=5082792 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
twiN-arginine translocation pathway signal sequence domain-containing protein Tax=GWE1_Burkholderiales_65_30_curated
twiN-arginine translocation pathway signal sequence domain-containing protein
bjp_ig2157_scaffold_1033_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10686..11171)
DNA (486bp) protein (162aa)
CinA domain-containing protein; K03743 id=5082791 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
CinA domain-containing protein; K03743 Tax=GWE1_Burkholderiales_65_30_curated
CinA domain-containing protein
bjp_ig2157_scaffold_1033_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11220..11696)
DNA (477bp) protein (159aa)
phosphatidylglycerophosphatase A; K01095 phosphatidylglycerophosphatase A [EC:3.1.3.27] Tax=GWE1_Burkholderiales_65_30_curated
phosphatidylglycerophosphatase (EC:3.1.3.27)
Phosphatidylglycerophosphatase A id=1274467 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
Displaying 16 items

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