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bjp_ig2157_scaffold_1406

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_1406_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..1333
DNA (1332bp) protein (444aa)
hypothetical protein id=5082196 bin=GWF1_Burkholderiales_GWF1_66_17 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_1406_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1442..1939
DNA (498bp) protein (166aa)
Putative uncharacterized protein id=1268658 bin=GWE1_Burkholderiales_65_30 species=Curvibacter putative symbiont of Hydra magnipapillata genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
MarR family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
transcriptional regulators
bjp_ig2157_scaffold_1406_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2028..3068
DNA (1041bp) protein (347aa)
Rieske (2Fe-2S) domain-containing protein; K03862 vanillate monooxygenase [EC:1.14.13.82] id=5082194 bin=GWF1_Burkholderiales_GWF1_66_17 species=Curvibacter putative symbiont of Hydra magnipapillata genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
Rieske (2Fe-2S) domain-containing protein; K03862 vanillate monooxygenase [EC:1.14.13.82] Tax=GWE1_Burkholderiales_65_30_curated
phenylpropionate dioxygenase and related ring-hydroxylating dioxygenase, large terminal subunit
bjp_ig2157_scaffold_1406_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3075..4046
DNA (972bp) protein (324aa)
ferredoxin; K03863 vanillate monooxygenase [EC:1.14.13.82] id=5082193 bin=GWF1_Burkholderiales_GWF1_66_17 species=Curvibacter putative symbiont of Hydra magnipapillata genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
ferredoxin; K03863 vanillate monooxygenase [EC:1.14.13.82] Tax=GWE1_Burkholderiales_65_30_curated
flavodoxin reductase family 1
bjp_ig2157_scaffold_1406_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4188..4652)
DNA (465bp) protein (155aa)
AsnC family transcriptional regulator id=5082192 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
AsnC family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
AsnC family transcriptional regulator
bjp_ig2157_scaffold_1406_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4818..5933
DNA (1116bp) protein (372aa)
1-aminocyclopropane-1-carboxylate deaminase (EC:3.5.99.7); K01505 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7] id=5082191 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
1-aminocyclopropane-1-carboxylate deaminase (EC:3.5.99.7) Tax=GWE1_Burkholderiales_65_30_curated
1-aminocyclopropane-1-carboxylate deaminase (EC:3.5.99.7)
bjp_ig2157_scaffold_1406_7
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5997..7364)
DNA (1368bp) protein (456aa)
Candidate Na+/H+ and K+/H+ antiporter, NhaP type n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y2M3_RAMTT rbh
Na+/H+ and K+/H+ antiporter, NhaP type
Candidate Na+/H+ and K+/H+ antiporter, NhaP type {ECO:0000313|EMBL:AEG92386.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" sour
bjp_ig2157_scaffold_1406_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7557..8042)
DNA (486bp) protein (162aa)
Transcriptional regulator id=1268651 bin=GWE1_Burkholderiales_65_30 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
AsnC family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
AsnC family transcriptional regulator
bjp_ig2157_scaffold_1406_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8145..9119
DNA (975bp) protein (325aa)
Pyruvate dehydrogenase E1 component id=1268650 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
2-oxoacid dehydrogenase subunit E1 Tax=GWE1_Burkholderiales_65_30_curated
2-oxo-acid dehydrogenase e1 subunit, homodimeric type
Displaying 9 items

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