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bjp_ig2157_scaffold_1432

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_1432_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..550
DNA (549bp) protein (183aa)
DNA topoisomerase III (EC:5.99.1.2); K03169 DNA topoisomerase III [EC:5.99.1.2] id=5081383 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
DNA topoisomerase III (EC:5.99.1.2); K03169 DNA topoisomerase III [EC:5.99.1.2] Tax=GWE1_Burkholderiales_65_30_curated
DNA topoisomerase III (EC:5.99.1.2)
bjp_ig2157_scaffold_1432_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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569..1225
DNA (657bp) protein (219aa)
glutathione S-transferase; K00799 glutathione S-transferase [EC:2.5.1.18] Tax=GWE1_Burkholderiales_65_30_curated
Glutathione S-transferase id=1283752 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
glutathione S-transferase
bjp_ig2157_scaffold_1432_3
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1272..2747)
DNA (1476bp) protein (492aa)
integral membrane sensor signal transduction histidine kinase; K07649 two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] id=5081385 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
signal transduction histidine kinase
Tax=BJP_08E140C01_Burkholderiales_65_30
bjp_ig2157_scaffold_1432_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2889..3563)
DNA (675bp) protein (225aa)
Two component transcriptional regulator, winged helix family id=1283750 bin=GWE1_Burkholderiales_65_30 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator Tax=GWE1_Burkholderiales_65_30_curated
two component transcriptional regulator
bjp_ig2157_scaffold_1432_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3733..4218)
DNA (486bp) protein (162aa)
MarR family transcriptional regulator id=5081387 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
MarR family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
MarR family transcriptional regulator
bjp_ig2157_scaffold_1432_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4472..5569
DNA (1098bp) protein (366aa)
Protein RecA id=1283748 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
recA protein; K03553 recombination protein RecA Tax=GWE1_Burkholderiales_65_30_curated
recA protein
bjp_ig2157_scaffold_1432_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5615..6064
DNA (450bp) protein (150aa)
regulatory protein RecX; K03565 regulatory protein id=5081389 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
regulatory protein RecX; K03565 regulatory protein Tax=GWE1_Burkholderiales_65_30_curated
regulatory protein RecX
bjp_ig2157_scaffold_1432_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6144..6611
DNA (468bp) protein (156aa)
hypothetical protein id=5081390 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_1432_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6625..7548)
DNA (924bp) protein (308aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] id=5081391 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] Tax=GWE1_Burkholderiales_65_30_curated
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
bjp_ig2157_scaffold_1432_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7740..8900
DNA (1161bp) protein (387aa)
succinyl-CoA synthetase subunit beta (EC:6.2.1.5); K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] id=5081392 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5) Tax=GWE1_Burkholderiales_65_30_curated
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Displaying 10 items

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