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bjp_ig2157_scaffold_1569

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2157_scaffold_1569_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..651)
DNA (651bp) protein (217aa)
sigma-54 dependent trancsriptional regulator id=5082924 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
sigma-54 dependent trancsriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
sigma-54 dependent trancsriptional regulator
bjp_ig2157_scaffold_1569_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

798..980
DNA (183bp) protein (61aa)
id=5082923 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
id=5082923 Tax=GWE1_Burkholderiales_65_30_curated
bjp_ig2157_scaffold_1569_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

985..2553
DNA (1569bp) protein (523aa)
cytochrome bd ubiquinol oxidase subunit I; K00425 cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-] id=5082922 bin=GWF1_Burkholderiales_GWF1_66_17 species=Oxalobacteraceae bacterium IMCC9480 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
cytochrome bd ubiquinol oxidase subunit I; K00425 cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-] Tax=GWE1_Burkholderiales_65_30_curated
cytochrome bd ubiquinol oxidase subunit I
bjp_ig2157_scaffold_1569_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2564..3700
DNA (1137bp) protein (379aa)
cytochrome d ubiquinol oxidase subunit II; K00426 cytochrome d ubiquinol oxidase subunit II [EC:1.10.3.-] Tax=GWE1_Burkholderiales_65_30_curated
Cytochrome d ubiquinol oxidase subunit II id=1274598 bin=GWE1_Burkholderiales_65_30 species=Oxalobacteraceae bacterium IMCC9480 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
cytochrome d ubiquinol oxidase subunit II
bjp_ig2157_scaffold_1569_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3833..5554
DNA (1722bp) protein (574aa)
cytochrome c family protein id=5082920 bin=GWF1_Burkholderiales_GWF1_66_17 species=Thauera sp. 63 genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
cytochrome c family protein Tax=GWE1_Burkholderiales_65_30_curated
cytochrome c family protein
bjp_ig2157_scaffold_1569_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5547..6245
DNA (699bp) protein (233aa)
cytochrome B561; K08354 thiosulfate reductase cytochrome b subunit id=5082919 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
cytochrome B561; K08354 thiosulfate reductase cytochrome b subunit Tax=GWE1_Burkholderiales_65_30_curated
cytochrome B561
bjp_ig2157_scaffold_1569_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6256..6876
DNA (621bp) protein (207aa)
petA2; ubiquinol-cytochrome c reductase, iron-sulfur subunit PetA2 (EC:1.10.2.2); K00411 ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:1.10.2.2] id=5082918 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
petA2; ubiquinol-cytochrome c reductase, iron-sulfur subunit PetA2 (EC:1.10.2.2); K00411 ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:1.10.2.2] Tax=GWE1_Burkholderiales_65_30_curated
petA2; ubiquinol-cytochrome c reductase, iron-sulfur subunit PetA2 (EC:1.10.2.2)
bjp_ig2157_scaffold_1569_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6896..7012
DNA (117bp) protein (39aa)
Cyd operon protein YbgT id=5082917 bin=GWF1_Burkholderiales_GWF1_66_17 species=Laribacter hongkongensis genus=Laribacter taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Cyd operon protein YbgT Tax=GWE1_Burkholderiales_65_30_curated
Cyd operon protein YbgT
bjp_ig2157_scaffold_1569_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7009..7323
DNA (315bp) protein (105aa)
hypothetical protein id=5082916 bin=GWF1_Burkholderiales_GWF1_66_17 species=Oxalobacteraceae bacterium IMCC9480 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
bjp_ig2157_scaffold_1569_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7325..7990
DNA (666bp) protein (222aa)
beta-lactamase domain-containing protein; K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6] id=5082915 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
beta-lactamase domain-containing protein; K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6] Tax=GWE1_Burkholderiales_65_30_curated
beta-lactamase domain-containing protein
bjp_ig2157_scaffold_1569_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8034..8264
DNA (231bp) protein (77aa)
Putative uncharacterized protein id=1274591 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
Displaying 11 items

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