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Ig5326_scaffold_41

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5326_scaffold_41_1
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(287..1756)
DNA (1470bp) protein (490aa)
Cysteine--tRNA ligase n=1 Tax=Coprobacter fastidiosus NSB1 RepID=U5CKG0_9PORP rbh
cysteinyl-tRNA synthetase
Tax=GWF2_Bacteroidetes_35_48_curated
Ig5326_scaffold_41_2
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

comp(1822..2739)
DNA (918bp) protein (306aa)
Putative metal-dependent membrane protease id=2003467 bin=GWD2_Bacteroidetes_33_33 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
peptidase
Tax=BJP_IG2103_Bacteroidetes_37_22
Ig5326_scaffold_41_3
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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2804..3793
DNA (990bp) protein (330aa)
tRNA-dihydrouridine synthase id=2000528 bin=GWE2_Bacteroidetes_42_24 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes rbh
nitrogen regulator protein NIfR3
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_4
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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3889..5238
DNA (1350bp) protein (450aa)
regulator n=1 Tax=Pontibacter roseus RepID=UPI0003810C3C
atoC; two-component response regulator
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_5
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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comp(5370..7703)
DNA (2334bp) protein (778aa)
von Willebrand factor type A like domain id=4589484 bin=GWC2_Nitrospirae_57_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8 rbh
von Willebrand factor A rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_6
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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comp(7868..8545)
DNA (678bp) protein (226aa)
Protein containing TonB, C-terminal domain id=3223761 bin=GWF2_Bacteroidetes_41_31 species=uncultured Flavobacteriia bacterium genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
TonB family protein
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_7
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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8864..9457
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036865A8
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_8
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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9463..10707
DNA (1245bp) protein (415aa)
TonB id=2601349 bin=GWF2_Bacteroidetes_43_11 species=uncultured Flavobacteriia bacterium genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
TonB family protein
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_9
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

10911..12761
DNA (1851bp) protein (617aa)
Lytic transglycosylase, catalytic id=4264514 bin=GWF2_Bacteroidetes_43_11 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes rbh
lytic transglycosylase, catalytic rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_10
unknown

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12709..12852
DNA (144bp) protein (48aa)

This feature has no annotations

Ig5326_scaffold_41_11
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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12895..13905
DNA (1011bp) protein (337aa)
Putative uncharacterized protein id=4497826 bin=GWF2_Bacteroidetes_41_31 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_12
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

14046..15005
DNA (960bp) protein (320aa)
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_13
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

15302..15907
DNA (606bp) protein (202aa)
Transcriptional regulator, TetR family id=1739248 bin=GWE2_Bacteroidetes_42_24 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
TetR family transcriptional regulator
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_14
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

15910..17199
DNA (1290bp) protein (430aa)
Outer membrane efflux protein id=2163555 bin=GWE2_Bacteroidetes_29_8 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
outer membrane efflux protein
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_15
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

17199..18089
DNA (891bp) protein (297aa)
Putative ABC transport system, lipoprotein id=1714578 bin=GWB2_Ignavibacteria_35_12 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
putative ABC transport system, lipoprotein
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_16
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

18176..18658
DNA (483bp) protein (161aa)
Putative uncharacterized protein id=3366194 bin=GWA2_Bacteroidetes_33_15 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_33_15 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_17
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

18661..19587
DNA (927bp) protein (309aa)
Sulfate-transporting ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIB3_NIAKG rbh
sulfate-transporting ATPase rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_18
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

19592..20329
DNA (738bp) protein (246aa)
Sulfate-transporting ATPase id=4533420 bin=GWF2_Bacteroidetes_33_38 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
ABC transporter related protein
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_19
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

20340..21434
DNA (1095bp) protein (365aa)
ABC-2 type transporter id=4497571 bin=GWF2_Bacteroidetes_41_31 species=Gillisia limnaea genus=Gillisia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
multidrug ABC transporter permease
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_20
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

21508..22554
DNA (1047bp) protein (349aa)
ABC transporter permease id=4497570 bin=GWF2_Bacteroidetes_41_31 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
ABC-2 type transporter
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_21
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

22790..24229
DNA (1440bp) protein (480aa)
lytic transglycosylase id=1775878 bin=GWD2_Bacteroidetes_33_33 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
lytic transglycosylase
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_22
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(24323..24730)
DNA (408bp) protein (136aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIJ9_CHIPD
NAD-dependent epimerase/dehydratase
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_23
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(24679..25338)
DNA (660bp) protein (220aa)
NAD-dependent epimerase/dehydratase id=3978937 bin=GWF2_Bacteroidetes_33_16 species=Imtechella halotolerans genus=Imtechella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
NAD-dependent epimerase/dehydratase
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_24
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(25640..26494)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B37525
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_25
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

26694..27983
DNA (1290bp) protein (430aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1) rbh
Tyrosine--tRNA ligase n=2 Tax=Bacteroides RepID=R6S2P7_9BACE rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_26
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(28037..28600)
DNA (564bp) protein (188aa)
phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9Z6I3_ODOSD
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_27
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

28784..29350
DNA (567bp) protein (189aa)
RNA polymerase, sigma-24 subunit, ECF subfamily id=4534888 bin=GWF2_Bacteroidetes_35_48 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
ECF subfamily RNA polymerase sigma-24 subunit
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_28
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

29347..30687
DNA (1341bp) protein (447aa)
id=2032637 bin=GWE2_Bacteroidetes_42_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_29
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

30701..32968
DNA (2268bp) protein (756aa)
PKD domain containing protein id=4264575 bin=GWF2_Bacteroidetes_43_11 species=Methanosarcina mazei genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
PKD domain-containing protein
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_41_30
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

33029..36118
DNA (3090bp) protein (1030aa)
PKD domain containing protein id=4364226 bin=GWF2_Bacteroidetes_29_10 species=Methanolinea tarda genus=Methanolinea taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
cell surface protein
Tax=BJP_IG2103_Bacteroidetes_41_9
Displaying items 1-30 of 80 in total

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