ggKbase home page

Ig5326_scaffold_232

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5326_scaffold_232_1
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(3..302)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BUP3_9FLAO
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_2
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(292..1890)
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BUP2_9FLAO rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_3
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

2248..2694
DNA (447bp) protein (149aa)
SsrA-binding protein id=3980469 bin=GWF2_Bacteroidetes_29_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
SsrA-binding protein
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_4
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

2816..3373
DNA (558bp) protein (186aa)
Putative uncharacterized protein id=3084047 bin=GWF2_Bacteroidetes_43_11 species=Cellulophaga algicola genus=Cellulophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
thioredoxin-like protein
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_5
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

3379..4377
DNA (999bp) protein (333aa)
quinone oxidoreductase n=1 Tax=Bacillus sp. FJAT-13831 RepID=UPI0002DD745F
YhdH/YhfP family quinone oxidoreductase
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_6
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

4417..4902
DNA (486bp) protein (162aa)
Uncharacterized protein id=4366645 bin=GWF2_Bacteroidetes_41_31 species=SAR86 cluster bacterium SAR86A genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_7
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(4999..5373)
DNA (375bp) protein (125aa)
MerP, putative id=3220667 bin=GWF2_Bacteroidetes_43_11 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
Heavy metal transport/detoxification protein
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_8
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(5559..7790)
DNA (2232bp) protein (744aa)
TonB-dependent receptor id=1774925 bin=GWE2_Bacteroidetes_42_24 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes rbh
TonB-dependent receptor rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_trna_1
unknown

Not on your lists

comp(8548..8621)
DNA (74bp)
transferRNA His
Ig5326_scaffold_232_9
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

8755..9525
DNA (771bp) protein (257aa)
TIGR00266 family protein id=1867872 bin=GWE2_Bacteroidetes_42_24 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes rbh
hypothetical protein rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_10
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

9570..10793
DNA (1224bp) protein (408aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component id=3826113 bin=GWF2_Bacteroidetes_33_16 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good rbh
dipeptide/oligopeptide/nickel ABC transporter permease rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_11
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(10806..12341)
DNA (1536bp) protein (512aa)
Putative uncharacterized protein id=4372114 bin=GWF2_Bacteroidetes_41_31 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_12
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

12589..13401
DNA (813bp) protein (271aa)
Uncharacterized protein id=4380705 bin=GWF2_Bacteroidetes_43_63 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_13
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

13398..14021
DNA (624bp) protein (208aa)
rhomboid family protein id=3108762 bin=GWF2_Bacteroidetes_41_31 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Rhomboid family membrane protein
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_14
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(14018..14581)
DNA (564bp) protein (188aa)
putative transcriptional regulator id=2574128 bin=GWF2_Bacteroidetes_33_16 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_15
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

14759..16132
DNA (1374bp) protein (458aa)
Putative uncharacterized protein id=3129780 bin=GWF2_Bacteroidetes_43_63 species=Butyrivibrio fibrisolvens genus=Butyrivibrio taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77 rbh
hypothetical protein rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_16
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

16129..17505
DNA (1377bp) protein (459aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase id=2190192 bin=GWE2_Bacteroidetes_42_24 species=Methylacidiphilum infernorum genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_17
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(17556..17762)
DNA (207bp) protein (69aa)
Putative uncharacterized protein id=1745362 bin=GWD2_Bacteroidetes_33_33 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_18
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

17946..18629
DNA (684bp) protein (228aa)
Putative uncharacterized protein id=4542406 bin=GWF2_Bacteroidetes_43_11 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_19
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

18744..19706
DNA (963bp) protein (321aa)
fmt; Methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X0H9_9PORP rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_20
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

19880..20152
DNA (273bp) protein (91aa)
Histone family protein DNA-binding protein id=3109077 bin=GWF2_Bacteroidetes_41_31 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
histone family protein DNA-binding protein
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_21
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(20168..20845)
DNA (678bp) protein (226aa)
Putative 3-methyladenine DNA glycosylase n=1 Tax=Pedobacter sp. BAL39 RepID=A6E8C9_9SPHI
mag; DNA-3-methyladenine glycosylase II
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_22
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(20787..22733)
DNA (1947bp) protein (649aa)
ATP-dependent DNA helicase, RecQ family id=4542470 bin=GWF2_Bacteroidetes_43_11 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes rbh
ATP-dependent DNA helicase RecQ
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_23
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

22896..23411
DNA (516bp) protein (172aa)
shikimate kinase id=4004054 bin=GWC2_Bacteroidetes_40_13 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
shikimate kinase
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_24
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(23580..24998)
DNA (1419bp) protein (473aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Tannerella sp. CAG:118 RepID=R5I7D4_9PORP rbh
putative RNA methyltransferase
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_25
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(25108..26280)
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI0003770FEA
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_26
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(26301..28466)
DNA (2166bp) protein (722aa)
SusD/RagB family protein id=1775507 bin=GWE2_Bacteroidetes_42_24 species=Flavobacteriales bacterium ALC-1 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes rbh
SusD/RagB family protein rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_27
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(28479..31511)
DNA (3033bp) protein (1011aa)
SusC/RagA family TonB-linked outer membrane protein id=3222022 bin=GWF2_Bacteroidetes_43_11 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes rbh
TonB dependent receptor rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_232_28
unknown

Not on your lists

comp(31543..31683)
DNA (141bp) protein (47aa)

This feature has no annotations

Ig5326_scaffold_232_29
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

32003..33040
DNA (1038bp) protein (346aa)
transcriptional regulator id=1775501 bin=GWE2_Bacteroidetes_42_24 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes rbh
LacI family transcriptional regulator
Tax=BJP_IG2103_Bacteroidetes_41_9
Displaying items 1-30 of 31 in total

View Taxonomy