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Ig5326_scaffold_496

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5326_scaffold_496_1
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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comp(24..470)
DNA (447bp) protein (149aa)
50S ribosomal protein L11 n=2 Tax=Pedobacter RepID=C6Y274_PEDHD
50S ribosomal protein L11
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_496_2
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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comp(515..1057)
DNA (543bp) protein (181aa)
transcription anti-termination protein id=3832102 bin=GWF2_Bacteroidetes_43_11 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
transcription termination/antitermination factor NusG
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_496_3
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(1129..1326)
DNA (198bp) protein (66aa)
Preprotein translocase, SecE subunit id=3832098 bin=GWF2_Bacteroidetes_43_11 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
Preprotein translocase subunit SecE
Tax=GWF2_Bacteroidetes_43_11_curated
Ig5326_scaffold_496_trna_6
unknown

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comp(1346..1418)
DNA (73bp)
transferRNA Trp
Ig5326_scaffold_496_4
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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comp(1528..2715)
DNA (1188bp) protein (396aa)
Elongation factor Tu id=3832095 bin=GWF2_Bacteroidetes_43_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes rbh
translation elongation factor 1a (ef-1a/ef-tu) rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_496_trna_5
unknown

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comp(2779..2850)
DNA (72bp)
transferRNA Thr
Ig5326_scaffold_496_trna_4
unknown

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comp(2901..2973)
DNA (73bp)
transferRNA Gly
Ig5326_scaffold_496_trna_3
unknown

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comp(3015..3096)
DNA (82bp)
transferRNA Tyr
Ig5326_scaffold_496_trna_2
unknown

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comp(3127..3200)
DNA (74bp)
transferRNA Thr
Ig5326_scaffold_496_5
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(3415..3711)
DNA (297bp) protein (99aa)
ribosomal subunit interface protein id=3642647 bin=GWF2_Bacteroidetes_41_31 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
ribosomal subunit interface protein
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_496_6
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(3727..4614)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000366DDAE
site-specific recombinase XerD
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_496_7
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(4723..4917)
DNA (195bp) protein (65aa)
30S ribosomal protein S21 id=1775665 bin=GWE2_Bacteroidetes_42_24 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_496_8
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(5020..7227)
DNA (2208bp) protein (736aa)
Dipeptidyl-peptidase IV (EC:3.4.14.5) rbh
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00036722D4 rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_496_trna_1
unknown

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7402..7476
DNA (75bp)
transferRNA Val
Ig5326_scaffold_496_9
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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comp(7614..8651)
DNA (1038bp) protein (346aa)
Putative membrane protein id=4498014 bin=GWF2_Bacteroidetes_41_31 species=Rheinheimera sp. A13L genus=Rheinheimera taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_496_10
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

8875..9663
DNA (789bp) protein (263aa)
Arginine-specific cysteine proteinase id=1738860 bin=GWE2_Bacteroidetes_42_24 species=Bacteroidetes oral taxon 274 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_496_11
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(9858..11762)
DNA (1905bp) protein (635aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XXJ3_9BACT rbh
hypothetical protein rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_496_12
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

11919..12971
DNA (1053bp) protein (351aa)
Endonuclease/exonuclease/phosphatase id=4439600 bin=GWF2_Bacteroidetes_35_48 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
endonuclease/exonuclease/phosphatase
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_496_13
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(12994..15024)
DNA (2031bp) protein (677aa)
ComEC/Rec2-related protein id=3804340 bin=GWF2_Bacteroidetes_33_38 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
ComEC/Rec2-like protein rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_496_14
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(15364..16383)
DNA (1020bp) protein (340aa)
TPR repeat n=1 Tax=Prochlorococcus marinus (strain MIT 9313) RepID=Q7V8P0_PROMM
TPR repeat-containing protein
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_496_15
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(16521..17630)
DNA (1110bp) protein (370aa)
lipid-A-disaccharide synthase (EC:2.4.1.182) rbh
LipiD-a-disaccharide synthase id=2770832 bin=GWF2_Bacteroidetes_41_31 species=Elizabethkingia anophelis genus=Elizabethkingia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_496_16
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(17639..17935)
DNA (297bp) protein (99aa)
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_496_17
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(17981..18757)
DNA (777bp) protein (259aa)
multifunctional protein surE (EC:3.1.3.5)
5'-nucleotidase SurE n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GDA1_LACS5
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_496_18
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(18883..19497)
DNA (615bp) protein (205aa)
hypothetical membrane protein id=4182350 bin=GWF2_Bacteroidetes_33_16 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
membrane protein
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_496_19
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(19642..20232)
DNA (591bp) protein (197aa)
Maf-like protein BACEGG_01909 id=1894857 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
maf protein
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_496_20
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(20334..21299)
DNA (966bp) protein (322aa)
UbiA prenyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PC71_CHIPD
ubiA; prenyltransferase
Tax=BJP_IG2103_Bacteroidetes_41_9
Ig5326_scaffold_496_21
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(21315..21443)
DNA (129bp) protein (43aa)
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45)
Putative hydrolase id=1775256 bin=GWE2_Bacteroidetes_42_24 species=Leeuwenhoekiella blandensis genus=Leeuwenhoekiella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
Tax=BJP_IG2103_Bacteroidetes_41_9
Displaying 27 items

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