ggKbase home page

07V140M03_2016_Ig8141_scaffold_28907

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t1_biofilm_scaffold_28907_trna_1
unknown

Not on your lists

comp(906..989)
DNA (84bp)
transferRNA Leu
07V140M03_2016_Ig8141_scaffold_28907_1
unknown

Not on your lists

1..108
DNA (108bp) protein (36aa)

This feature has no annotations

07V140M03_2016_Ig8141_scaffold_28907_2
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157..822)
DNA (666bp) protein (222aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-O11 RepID=UPI000364FAD2
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
07V140M03_2016_Ig8141_scaffold_28907_3
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(866..2197)
DNA (1332bp) protein (444aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8REY3_DESPD
amidohydrolase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
07V140M03_2016_Ig8141_scaffold_28907_4
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2210..3034)
DNA (825bp) protein (275aa)
Purine nucleoside phosphorylase Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z194_DESAT
purine nucleoside phosphorylase I, inosine and guanosine-specific
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
07V140M03_2016_Ig8141_scaffold_28907_5
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3150..4220)
DNA (1071bp) protein (357aa)
Putative Histidine kinase Tax=Nitrospina gracilis 3/211 RepID=M1Z8H9_9BACT
multi-sensor signal transduction histidine kinase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
07V140M03_2016_Ig8141_scaffold_28907_6
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4338..5729)
DNA (1392bp) protein (464aa)
threonine synthase (EC:4.2.3.1)
Threonine synthase Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z193_DESAT
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
07V140M03_2016_Ig8141_scaffold_28907_7
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5940..7490)
DNA (1551bp) protein (517aa)
phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z192_DESAT
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
07V140M03_2016_Ig8141_scaffold_28907_8
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7516..7902)
DNA (387bp) protein (129aa)
Ribosomal silencing factor RsfS Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P9Z1_DESSD
iojap-like ribosome-associated protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_28907_9

Not on your lists

8092..8313
DNA (222bp) protein (74aa)
Nitrogen-fixing NifU protein Tax=uncultured bacterium RepID=K1Z8H6_9BACT
Nitrogen-fixing NifU protein {ECO:0000313|EMBL:EKD40783.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
nitrogen-fixing NifU domain-containing protein
07V140M03_2016_Ig8141_scaffold_28907_10
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8333..8803)
DNA (471bp) protein (157aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1ZSW3_9BACT
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
07V140M03_2016_Ig8141_scaffold_28907_11

Not on your lists

comp(8815..9213)
DNA (399bp) protein (133aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1YUG0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD40786.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative Fe-S oxidoreductase
07V140M03_2016_Ig8141_scaffold_28907_12
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9279..10136)
DNA (858bp) protein (286aa)
Agmatinase Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z1F1_DESAT
agmatinase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_28907_13
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10185..10739)
DNA (555bp) protein (185aa)
UPF0301 protein MldDRAFT_1317/MldDRAFT_4129 Tax=delta proteobacterium MLMS-1 RepID=Q1NQW6_9DELT
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
07V140M03_2016_Ig8141_scaffold_28907_14
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11084..13279
DNA (2196bp) protein (732aa)
1,4-alpha-glucan branching enzyme GlgB Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z2I1_DESAT
1,4-alpha-glucan branching enzyme
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_28907_15
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13292..13486
DNA (195bp) protein (65aa)
Putative uncharacterized protein Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z2I2_DESAT
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_28907_16
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13483..14565)
DNA (1083bp) protein (361aa)
Glycosyl transferase, group 1 Tax=delta proteobacterium MLMS-1 RepID=Q1NXJ1_9DELT
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_28907_17
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14582..15418)
DNA (837bp) protein (279aa)
Heat shock protein DnaJ-like Tax=delta proteobacterium MLMS-1 RepID=Q1NQX0_9DELT
heat shock protein DnaJ domain protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_28907_18
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15415..16461)
DNA (1047bp) protein (349aa)
Signal recognition particle receptor FtsY Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z2I4_DESAT
signal recognition particle-docking protein FtsY
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
07V140M03_2016_Ig8141_scaffold_28907_19
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16474..17322)
DNA (849bp) protein (283aa)
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z2I3_DESAT
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_28907_20
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17596..18468
DNA (873bp) protein (291aa)
Uncharacterized protein Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PB78_DESSD
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Displaying 21 items

View Taxonomy