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07V140M03_2016_Ig8141_scaffold_41505

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07V140M03_2016_Ig8141_scaffold_41505_1
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

471..860
DNA (390bp) protein (130aa)
Putative lipoprotein bin=GWF2_Nitrospirae_44_13 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_41505_2
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

885..2183
DNA (1299bp) protein (433aa)
Outer membrane efflux protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
RND transporter
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_41505_3
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2180..3433
DNA (1254bp) protein (418aa)
Efflux transporter, RND family, MFP subunit bin=GWF2_Nitrospirae_44_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_41505_4
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3430..6630
DNA (3201bp) protein (1067aa)
Putative cation efflux system protein silA bin=GWB2_Nitrospirae_rel_47_37 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
silA; cation efflux system protein silA
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_41505_5
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6838..8496
DNA (1659bp) protein (553aa)
Sensor protein Tax=uncultured bacterium RepID=K1YGQ2_9BACT
PAS:hemerythrin HHE cation binding region
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_41505_6
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8631..9755)
DNA (1125bp) protein (375aa)
Permease Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FLL2_DESAA
permease
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_41505_7
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9759..10109)
DNA (351bp) protein (117aa)
Related to cadmium efflux system accessory protein Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AS13_DESPS
cadmium efflux system accessory protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
07V140M03_2016_Ig8141_scaffold_41505_8
unknown

Not on your lists

10621..10728
DNA (108bp) protein (36aa)

This feature has no annotations

07V140M03_2016_Ig8141_scaffold_41505_9
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10773..11381
DNA (609bp) protein (203aa)
Uncharacterized membrane-associated protein-like protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBX0_GEOUR
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_41505_10
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11529..11945)
DNA (417bp) protein (139aa)
Rhodanese domain protein Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E2N6_GEOLS
rhodanese
Rhodanese domain protein {ECO:0000313|EMBL:ACD95693.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
07V140M03_2016_Ig8141_scaffold_41505_11
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12441..13547
DNA (1107bp) protein (369aa)
Uncharacterized protein Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AMW4_DESPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAG36310.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfotalea psychrophila (strain LSv54 / DSM 12343).;"
07V140M03_2016_Ig8141_scaffold_41505_12
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13957..15009
DNA (1053bp) protein (351aa)
Amidohydrolase Tax=Polaromonas sp. CF318 RepID=J3D350_9BURK
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
07V140M03_2016_Ig8141_scaffold_41505_13
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15155..16219)
DNA (1065bp) protein (355aa)
Putative protease Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RGP0_DESPD
putative protease
Putative protease {ECO:0000313|EMBL:ADW16220.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
07V140M03_2016_Ig8141_scaffold_41505_14
Methanocaldococcus fervens, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(16319..17086)
DNA (768bp) protein (256aa)
ABC transporter related Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P6P5_METFA
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACV24227.1}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86); (Methanococcus fervens).;"
07V140M03_2016_Ig8141_scaffold_41505_15
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17089..18141)
DNA (1053bp) protein (351aa)
Transport system permease protein Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RTU7_ALLVD
transport system permease
Transport system permease protein {ECO:0000313|EMBL:ADC62606.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;"
07V140M03_2016_Ig8141_scaffold_41505_16
Methanocaldococcus vulcanius, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(18142..19263)
DNA (1122bp) protein (374aa)
Periplasmic binding protein Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RGY1_METVM
periplasmic binding protein
Periplasmic binding protein {ECO:0000313|EMBL:ACX72833.1}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7); (Methanococcus vulcanius).;"
07V140M03_2016_Ig8141_scaffold_41505_17
Sulfurospirillum sp. MES, Sulfurospirillum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19295..19831)
DNA (537bp) protein (179aa)
Formylmethanofuran dehydrogenase subunit E Tax=Sporomusa ovata DSM 2662 RepID=T0IMW9_9FIRM
Formylmethanofuran dehydrogenase {ECO:0000313|EMBL:KHG33160.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Sulfurospirillum.;" source="Sulfurospirillum sp. MES.;"
formylmethanofuran dehydrogenase subunit E
07V140M03_2016_Ig8141_scaffold_41505_18
unknown

Not on your lists

comp(19891..20481)
DNA (591bp) protein (197aa)

This feature has no annotations

07V140M03_2016_Ig8141_scaffold_41505_19
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20496..22733)
DNA (2238bp) protein (746aa)
TonB-dependent receptor Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RTU5_ALLVD
TonB-dependent receptor {ECO:0000313|EMBL:EXJ14104.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp. AK35.;"
TonB-dependent receptor
07V140M03_2016_Ig8141_scaffold_41505_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(22850..23218)
DNA (369bp) protein (123aa)
TonB family protein bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TonB family protein
Tax=GWA2_Rokubacteria_73_35_curated
07V140M03_2016_Ig8141_scaffold_41505_21
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23513..24298
DNA (786bp) protein (262aa)
Histidine kinase Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z2Y4_DESAT
histidine kinase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_41505_22
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24295..25182
DNA (888bp) protein (296aa)
Ribosomal RNA small subunit methyltransferase I Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z2Y3_DESAT
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_41505_23
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25187..25564
DNA (378bp) protein (126aa)
CrcB protein; K06199 CrcB protein bin=GWC2_NOV_55_46 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
CrcB protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
07V140M03_2016_Ig8141_scaffold_41505_24
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25875..26216
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BVT4_NITHN
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_41505_25
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26250..27086
DNA (837bp) protein (279aa)
hypothetical protein Tax=Thermodesulfatator atlanticus RepID=UPI0003B636B0
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
07V140M03_2016_Ig8141_scaffold_41505_26
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27104..28060)
DNA (957bp) protein (319aa)
Putative permease Tax=Desulfovibrio africanus PCS RepID=M5PR37_DESAF
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
07V140M03_2016_Ig8141_scaffold_41505_27
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28129..28284)
DNA (156bp) protein (52aa)
Uncharacterized protein Tax=Desulfovibrio vulgaris RepID=E3IMD4_DESVR
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_41505_28
GWA2_OP3_52_8_curated, Omnitrophica, Bacteria

Not on your lists

comp(28406..29584)
DNA (1179bp) protein (393aa)
chromate transporter, chromate ion transporter (CHR) family; K07240 chromate transporter bin=bin5_DeltaP species=Thermodesulfobacterium thermophilum genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
chromate ion transporter family chromate transporter
Tax=GWA2_OP3_52_8_curated
07V140M03_2016_Ig8141_scaffold_41505_29
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29627..30301)
DNA (675bp) protein (225aa)
Uncharacterized protein Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PLE0_DESSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF77291.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
07V140M03_2016_Ig8141_scaffold_41505_30
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30976..31749)
DNA (774bp) protein (258aa)
Transposase {ECO:0000313|EMBL:AJY70304.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
Transposase, mutator type bin=GWD2_Desulfuromonadales_54_10 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
transposase, mutator type
Displaying items 1-30 of 80 in total

View Taxonomy