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07V140M03_2016_Ig8141_scaffold_36577

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07V140M03_2016_Ig8141_scaffold_36577_1
unknown

Not on your lists

comp(388..615)
DNA (228bp) protein (76aa)

This feature has no annotations

07V140M03_2016_Ig8141_scaffold_36577_2
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(807..2279)
DNA (1473bp) protein (491aa)
Uncharacterized protein Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NA78_DESSD
Protein of unknown function (DUF3373)
Uncharacterized protein {ECO:0000313|EMBL:AGF76759.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
07V140M03_2016_Ig8141_scaffold_36577_3
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2322..2624)
DNA (303bp) protein (101aa)
Uncharacterized protein Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PJS6_DESSD
hypothetical protein
Tax=CG_Delta_06
07V140M03_2016_Ig8141_scaffold_36577_4
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2787..3842)
DNA (1056bp) protein (352aa)
Hydrogenase expression/formation protein HypE Tax=Caldithrix abyssi DSM 13497 RepID=H1XT42_9BACT
hydrogenase expression/formation protein HypE
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
07V140M03_2016_Ig8141_scaffold_36577_5
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3835..4929)
DNA (1095bp) protein (365aa)
Hydrogenase expression/formation protein HypD Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QTT5_CHLT3
hydrogenase expression/formation protein HypD
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_36577_6
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5086..5358)
DNA (273bp) protein (91aa)
Hydrogenase expression/formation protein (HUPF/HYPC) Tax=delta proteobacterium MLMS-1 RepID=Q1NMJ5_9DELT
hydrogenase assembly chaperone hypC/hupF
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_36577_7
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5363..7723)
DNA (2361bp) protein (787aa)
(NiFe) hydrogenase maturation protein HypF Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BEE9_CHLPD
(NiFe) hydrogenase maturation protein HypF
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_36577_8
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7693..8454)
DNA (762bp) protein (254aa)
Hydrogenase accessory protein HypB Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z6H6_DESAT
hydrogenase accessory protein HypB
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_36577_9
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8463..8810)
DNA (348bp) protein (116aa)
Probable hydrogenase nickel incorporation protein HypA Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=HYPA_CHLP8
hydrogenase nickel insertion protein HypA
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
07V140M03_2016_Ig8141_scaffold_36577_10
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8898..10934)
DNA (2037bp) protein (679aa)
PAS domain S-box Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PFN8_DESSD
PAS domain S-box
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_36577_11
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11164..11838)
DNA (675bp) protein (225aa)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI00036D6F6D
LuxR family transcriptional regulator
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_36577_12
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11978..12466)
DNA (489bp) protein (163aa)
Hydrogenase maturation protein hupD Tax=Azospirillum brasilense Sp245 RepID=G8ANU8_AZOBR
hybD; hydrogenase 2 maturation endopeptidase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_36577_13
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12541..14244)
DNA (1704bp) protein (568aa)
Nickel-dependent hydrogenase large subunit bin=GWB1_Deltaproteobacteria_rel_55_8 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
nickel-dependent hydrogenase large subunit
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_36577_14
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14269..15405)
DNA (1137bp) protein (379aa)
Polysulfide reductase bin=GWB1_Deltaproteobacteria_rel_55_8 species=Thiocystis violascens genus=Thiocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
polysulfide reductase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_36577_15
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15445..16395)
DNA (951bp) protein (317aa)
Uncharacterized protein bin=GWB1_Deltaproteobacteria_rel_55_8 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Fe-S-cluster-containing hydrogenase subunit
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_36577_16
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16399..17523)
DNA (1125bp) protein (375aa)
Ni,Fe-hydrogenase I small subunit bin=GWB1_Deltaproteobacteria_rel_55_8 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Ni,Fe-hydrogenase I small subunit
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_36577_17
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17766..18905
DNA (1140bp) protein (380aa)
Uncharacterized protein Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PID3_DESSD
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
07V140M03_2016_Ig8141_scaffold_36577_18
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19129..19539
DNA (411bp) protein (137aa)
Single-stranded DNA-binding protein Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z5C9_DESAT
single-strand binding protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_36577_19
GWA2_Desulfovibrionales_65_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19587..20528
DNA (942bp) protein (314aa)
Chaperone DnaJ domain protein Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z399_DESAT
chaperone DnaJ domain protein
Tax=GWA2_Desulfovibrionales_65_9_curated
07V140M03_2016_Ig8141_scaffold_36577_20
GWA2_Desulfovibrionales_65_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20676..21389)
DNA (714bp) protein (238aa)
Tax=GWA2_Desulfovibrionales_65_9_curated
07V140M03_2016_Ig8141_scaffold_36577_21
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21530..22420)
DNA (891bp) protein (297aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z3A4_DESAT
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_36577_22
unknown

Not on your lists

22465..22593
DNA (129bp) protein (43aa)

This feature has no annotations

07V140M03_2016_Ig8141_scaffold_36577_23
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22632..24467)
DNA (1836bp) protein (612aa)
DNA mismatch repair protein MutL Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z3A8_DESAT
DNA mismatch repair protein MutL
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_36577_24
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24471..25841)
DNA (1371bp) protein (457aa)
Peptidase M23B bin=GWC2_Nitrospirae-rel_56_14 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Peptidase M23
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_36577_25
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26283..27314
DNA (1032bp) protein (344aa)
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein bin=GWC2_Nitrospirae-rel_56_14 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
HI0933 family protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_36577_26
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27516..28082
DNA (567bp) protein (189aa)
Putative uncharacterized protein bin=GWC2_Nitrospirae-rel_56_14 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
ATPase, YjeE family
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
07V140M03_2016_Ig8141_scaffold_36577_27
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28118..29902)
DNA (1785bp) protein (595aa)
histidine kinase (EC:2.7.13.3)
Response regulator receiver Tax=delta proteobacterium MLMS-1 RepID=Q1NSX7_9DELT
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
07V140M03_2016_Ig8141_scaffold_36577_28
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29910..30752)
DNA (843bp) protein (281aa)
HDIG Tax=delta proteobacterium MLMS-1 RepID=Q1NKA7_9DELT
metal dependent phosphohydrolase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_36577_29
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30821..31147)
DNA (327bp) protein (109aa)
Hpt Tax=delta proteobacterium MLMS-1 RepID=Q1NKA6_9DELT
Hpt protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
07V140M03_2016_Ig8141_scaffold_36577_30
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31339..31986)
DNA (648bp) protein (216aa)
Sua5/YciO/YrdC/YwlC family protein Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z3B6_DESAT
Sua5/YciO/YrdC/YwlC family protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Displaying items 1-30 of 77 in total

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