ggKbase home page

07V140M03_2016_Ig8141_scaffold_55682

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07V140M03_2016_Ig8141_scaffold_55682_1
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

464..1819
DNA (1356bp) protein (452aa)
ResB protein required for cytochrome c biosynthesis Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PGV1_DESSD
ResB protein required for cytochrome c biosynthesis
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
07V140M03_2016_Ig8141_scaffold_55682_2
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1829..2665
DNA (837bp) protein (279aa)
Cytochrome c-type biogenesis protein CcsB Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P7Y2_DESSD
cytochrome c-type biogenesis protein CcsB
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
07V140M03_2016_Ig8141_scaffold_55682_3
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2796..3089
DNA (294bp) protein (98aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G875_GEOUR
hypothetical protein
Tax=GWC2_Geobacteraceae_53_11_curated
07V140M03_2016_Ig8141_scaffold_55682_4
unknown

Not on your lists

comp(3726..3962)
DNA (237bp) protein (79aa)

This feature has no annotations

07V140M03_2016_Ig8141_scaffold_55682_5
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4001..4354)
DNA (354bp) protein (118aa)
Transcriptional regulator, MerR family Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RH00_DESPD
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ADW18345.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
07V140M03_2016_Ig8141_scaffold_55682_6
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4444..5628)
DNA (1185bp) protein (395aa)
Polysulphide reductase NrfD Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RH01_DESPD
polusulphide reductase NrfD
Polysulphide reductase NrfD {ECO:0000313|EMBL:ADW18346.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
07V140M03_2016_Ig8141_scaffold_55682_7
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6733..7161)
DNA (429bp) protein (143aa)
Uncharacterized protein Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4J1T5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KGO33003.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
hypothetical protein
07V140M03_2016_Ig8141_scaffold_55682_8
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7184..7939)
DNA (756bp) protein (252aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RH04_DESPD
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ADW18349.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
07V140M03_2016_Ig8141_scaffold_55682_9
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8300..10699
DNA (2400bp) protein (800aa)
PAS modulated sigma54 specific transcriptional regulator, Fis family Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RH05_DESPD
PAS modulated sigma54 specific transcriptional regulator, Fis family
Tax=CG_Delta_06
07V140M03_2016_Ig8141_scaffold_55682_10
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10889..12010)
DNA (1122bp) protein (374aa)
Export ABC transporter permease protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LY78_SYNAS
Antibiotic transport system permease protein {ECO:0000313|EMBL:GAN34820.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
export ABC transporter permease
07V140M03_2016_Ig8141_scaffold_55682_11
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12013..14796)
DNA (2784bp) protein (928aa)
Export ABC transporter ATP-binding protein / export ABC transporter permease protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LY71_SYNAS
export ABC transporter ATP-binding protein/export ABC transporter permease
Export ABC transporter ATP-binding protein / export ABC transporter permease protein {ECO:0000313|EMBL:ABC79034.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
07V140M03_2016_Ig8141_scaffold_55682_12
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14793..15866)
DNA (1074bp) protein (358aa)
Secretion protein HlyD family protein Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E222_GEOLS
secretion protein HlyD
Secretion protein HlyD family protein {ECO:0000313|EMBL:ACD97125.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
07V140M03_2016_Ig8141_scaffold_55682_13
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15916..17361)
DNA (1446bp) protein (482aa)
Efflux pump, RND family, outer membrane lipoprotein Tax=Geobacter metallireducens RepID=Q39XH1_GEOMG
efflux pump, RND family, outer membrane lipoprotein
Efflux pump, RND family, outer membrane lipoprotein {ECO:0000313|EMBL:ABB31053.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
07V140M03_2016_Ig8141_scaffold_55682_14
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17363..20524)
DNA (3162bp) protein (1054aa)
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3U3_GEODF
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
Efflux pump, RND family, inner membrane protein {ECO:0000313|EMBL:ACM19586.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
07V140M03_2016_Ig8141_scaffold_55682_15
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20537..21733)
DNA (1197bp) protein (399aa)
Efflux pump, RND family, membrane fusion lipoprotein Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7ALL6_GEOSK
hemolysin D
Hemolysin D {ECO:0000313|EMBL:AJE02685.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
07V140M03_2016_Ig8141_scaffold_55682_16
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21891..22466)
DNA (576bp) protein (192aa)
TetR family transcriptional regulator
Transcriptional regulator, TetR family bin=GWB2_Geobacter-like_52_12 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
07V140M03_2016_Ig8141_scaffold_55682_17
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22692..23138)
DNA (447bp) protein (149aa)
MerR family transcriptional regulator Tax=uncultured bacterium RepID=K1YVE4_9BACT
MerR family transcriptional regulator
Tax=CG_Delta_06
07V140M03_2016_Ig8141_scaffold_55682_18
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23159..24352)
DNA (1194bp) protein (398aa)
Polysulphide reductase NrfD Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RH07_DESPD
polusulphide reductase NrfD
Tax=CG_Delta_06
07V140M03_2016_Ig8141_scaffold_55682_19
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25510..27540
DNA (2031bp) protein (677aa)
Penicillin-binding protein 1A Tax=delta proteobacterium MLMS-1 PF1_9DELT">RepID=Q1NPF1_9DELT
penicillin-binding protein, 1A family
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Displaying 19 items

View Taxonomy