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07V140M03_2016_Ig8141_scaffold_60338

Search features with annotation key words

Displaying items 1-30 of 221 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07V140M03_2016_Ig8141_scaffold_60338_1
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(207..1559)
DNA (1353bp) protein (451aa)
O-glycosyl hydrolase Tax=Methylomicrobium album BG8 RepID=H8GH80_METAL
glucosylceramidase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
07V140M03_2016_Ig8141_scaffold_60338_2
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(1868..2644)
DNA (777bp) protein (259aa)
amn; AMP nucleosidase (EC:3.2.2.4)
AMP nucleosidase Tax=Chlamydophila felis (strain Fe/C-56) RepID=Q255X4_CHLFF
Tax=BJP_IG2069_Spirochaetales_48_31
07V140M03_2016_Ig8141_scaffold_60338_3
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2659..3957)
DNA (1299bp) protein (433aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase Tax=delta proteobacterium MLMS-1 RepID=Q1NT50_9DELT
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_60338_4
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4350..4691
DNA (342bp) protein (114aa)
Sec-independent protein secretion pathway component Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PB23_DESSD
Sec-independent protein secretion pathway component
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_60338_5
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4688..5419
DNA (732bp) protein (244aa)
Sec-independent protein translocase protein TatC Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z4B1_DESAT
Sec-independent protein translocase, TatC subunit
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_60338_6
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5635..6804)
DNA (1170bp) protein (390aa)
Oxidoreductase domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XAE0_9BACT
oxidoreductase domain-containing protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
07V140M03_2016_Ig8141_scaffold_60338_7
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7187..8782)
DNA (1596bp) protein (532aa)
Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PDW1_DESSD
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_60338_8
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9018..9137
DNA (120bp) protein (40aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_60338_9
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9248..10255)
DNA (1008bp) protein (336aa)
Radical SAM domain protein Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z4B0_DESAT
Radical SAM domain protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_60338_10
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10268..10777)
DNA (510bp) protein (170aa)
CMP/dCMP deaminase zinc-binding protein Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z647_DESAT
CMP/dCMP deaminase zinc-binding protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_60338_11
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10949..11242
DNA (294bp) protein (98aa)
Putative uncharacterized protein Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z4A9_DESAT
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
07V140M03_2016_Ig8141_scaffold_60338_12
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11340..12158)
DNA (819bp) protein (273aa)
Short-chain dehydrogenase/reductase SDR Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z4A8_DESAT
short-chain dehydrogenase/reductase SDR
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_60338_13
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12196..13734)
DNA (1539bp) protein (513aa)
Lytic transglycosylase catalytic Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z4A7_DESAT
Lytic transglycosylase catalytic
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_60338_14
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14169..15749
DNA (1581bp) protein (527aa)
Chemotaxis sensory transducer Tax=delta proteobacterium MLMS-1 RepID=Q1NQK5_9DELT
methyl-accepting chemotaxis sensory transducer
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_60338_15
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16144..18447
DNA (2304bp) protein (768aa)
CheA signal transduction histidine kinase Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z4A4_DESAT
chemotaxis protein CheA
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
07V140M03_2016_Ig8141_scaffold_60338_16

Not on your lists

18541..19044
DNA (504bp) protein (168aa)
CheW-like protein Tax=uncultured bacterium RepID=K1YDI2_9BACT
CheW-like protein {ECO:0000313|EMBL:EKD40925.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
chemotaxis protein CheW
07V140M03_2016_Ig8141_scaffold_60338_17
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19233..20093
DNA (861bp) protein (287aa)
chemotaxis protein CheR (EC:2.1.1.80)
Uncharacterized protein (Fragment) Tax=uncultured bacterium RepID=K1YUW5_9BACT
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
07V140M03_2016_Ig8141_scaffold_60338_18
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20150..20629
DNA (480bp) protein (160aa)
Probable chemoreceptor glutamine deamidase CheD bin=GWF2_Syntrophobacterales_56_9 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
chemotaxis protein CheD
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_60338_19
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20626..21471
DNA (846bp) protein (282aa)
HDIG bin=GWF2_Syntrophobacterales_56_9 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
metal dependent phosphohydrolase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_60338_20
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21714..22151
DNA (438bp) protein (146aa)
Response regulator receiver bin=GWF2_Syntrophobacterales_56_9 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
response regulator receiver protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
07V140M03_2016_Ig8141_scaffold_60338_21
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22179..22637
DNA (459bp) protein (153aa)
Putative uncharacterized protein bin=GWF2_Syntrophobacterales_56_9 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_60338_22
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22699..23730
DNA (1032bp) protein (344aa)
response regulator receiver modulated chemotaxis protein CheB (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase bin=GWF2_Syntrophobacterales_56_9 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
07V140M03_2016_Ig8141_scaffold_60338_23
unknown

Not on your lists

23852..24517
DNA (666bp) protein (222aa)

This feature has no annotations

07V140M03_2016_Ig8141_scaffold_60338_24
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24617..25732
DNA (1116bp) protein (372aa)
Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 bin=GWF2_Syntrophobacterales_56_9 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
07V140M03_2016_Ig8141_scaffold_60338_25
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25845..26516
DNA (672bp) protein (224aa)
5-formyltetrahydrofolate cyclo-ligase bin=GWF2_Syntrophobacterales_56_9 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
5-formyltetrahydrofolate cyclo-ligase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
07V140M03_2016_Ig8141_scaffold_60338_26
unknown

Not on your lists

26513..26995
DNA (483bp) protein (161aa)

This feature has no annotations

07V140M03_2016_Ig8141_scaffold_60338_27
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27524..27739
DNA (216bp) protein (72aa)
Sec-independent periplasmic protein translocase bin=GWF2_Syntrophobacterales_56_9 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Sec-independent protein secretion pathway component TatC
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
07V140M03_2016_Ig8141_scaffold_60338_28

Not on your lists

27778..28275
DNA (498bp) protein (166aa)
Sec-independent protein translocase protein TatC Tax=uncultured bacterium RepID=K1YVF1_9BACT
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
twin arginine targeting protein translocase subunit TatC
07V140M03_2016_Ig8141_scaffold_60338_29
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28437..28745)
DNA (309bp) protein (103aa)
Putative uncharacterized protein bin=GWF2_Syntrophobacterales_56_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_60338_30
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29241..30719
DNA (1479bp) protein (493aa)
Flagellin domain protein Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GCF9_NITSI
Uncharacterized protein {ECO:0000313|EMBL:KIN88479.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
flagellin domain-containing protein
Displaying items 1-30 of 221 in total

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