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07V140M03_2016_Ig8141_scaffold_8170

Search features with annotation key words

Displaying items 1-30 of 135 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07V140M03_2016_Ig8141_scaffold_8170_1
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

156..1745
DNA (1590bp) protein (530aa)
ABC transporter related Tax=delta proteobacterium MLMS-1 RepID=Q1NK29_9DELT
ABC-type uncharacterized transport system, duplicated ATPase component
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
07V140M03_2016_Ig8141_scaffold_8170_2
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2116..2316
DNA (201bp) protein (67aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GB97_GEOUR
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_8170_3
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2313..2723
DNA (411bp) protein (137aa)
PilT protein domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GB96_GEOUR
PilT domain-containing protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_8170_4
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2916..3935
DNA (1020bp) protein (340aa)
Uncharacterized protein Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P5S9_DESSD
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
07V140M03_2016_Ig8141_scaffold_8170_5
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4178..5731
DNA (1554bp) protein (518aa)
Cytochrome-c3 hydrogenase (EC:1.12.2.1)
Cytochrome-c3 hydrogenase Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z1C4_DESAT
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_8170_6
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5875..6828
DNA (954bp) protein (318aa)
hydrogenase (NiFe) small subunit HydA (EC:1.12.99.6)
Hydrogenase (NiFe) small subunit HydA Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z1C3_DESAT
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_8170_7
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6842..9175
DNA (2334bp) protein (778aa)
chemotaxis protein CheA (EC:2.7.13.3)
CheA signal transduction histidine kinase Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z1C2_DESAT
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_8170_8
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9270..9800
DNA (531bp) protein (177aa)
CheC domain protein bin=GWF2_Syntrophobacterales_56_9 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
chemotaxis protein CheC
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_8170_9
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9800..10198
DNA (399bp) protein (133aa)
Response regulator receiver protein bin=GWF2_Syntrophobacterales_56_9 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
response regulator receiver protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_8170_10
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10501..11097
DNA (597bp) protein (199aa)
cyclophilin type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase bin=GWF2_Syntrophobacterales_56_9 species=Oreochromis niloticus genus=Oreochromis taxon_order=Perciformes taxon_class=Actinopterygii phylum=Chordata tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
07V140M03_2016_Ig8141_scaffold_8170_11
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11140..11565
DNA (426bp) protein (142aa)
Putative uncharacterized protein bin=GWF2_Syntrophobacterales_56_9 species=Thiorhodospira sibirica genus=Thiorhodospira taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_8170_12
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(11583..12038)
DNA (456bp) protein (152aa)
Uncharacterized protein bin=GWF2_Syntrophobacterales_56_9 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWF2_Lentisphaerae_57_35_curated
07V140M03_2016_Ig8141_scaffold_8170_13

Not on your lists

comp(12161..12532)
DNA (372bp) protein (124aa)
Putative uncharacterized protein bin=GWF2_Syntrophobacterales_56_9 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EKD40730.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
07V140M03_2016_Ig8141_scaffold_8170_14
unknown

Not on your lists

comp(12947..13222)
DNA (276bp) protein (92aa)

This feature has no annotations

07V140M03_2016_Ig8141_scaffold_8170_15
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13341..14348)
DNA (1008bp) protein (336aa)
Membrane protein, putative Tax=delta proteobacterium MLMS-1 RepID=Q1NWY7_9DELT
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
07V140M03_2016_Ig8141_scaffold_8170_16
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14338..15015)
DNA (678bp) protein (226aa)
ABC transporter related Tax=delta proteobacterium MLMS-1 RepID=Q1NWY6_9DELT
ABC transporter related protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_8170_17
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15020..16225)
DNA (1206bp) protein (402aa)
Putative uncharacterized protein Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z251_DESAT
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_8170_18
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16222..16566)
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=delta proteobacterium MLMS-1 RepID=Q1NWY4_9DELT
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_8170_19
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16508..17023)
DNA (516bp) protein (172aa)
NosL protein Tax=delta proteobacterium MLMS-1 RepID=Q1NID3_9DELT
NosL family protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
07V140M03_2016_Ig8141_scaffold_8170_20
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17035..17562)
DNA (528bp) protein (176aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z254_DESAT
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
07V140M03_2016_Ig8141_scaffold_8170_21
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17612..18289)
DNA (678bp) protein (226aa)
ABC transporter related bin=GWB2_Nitrospirae_rel_47_37 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
ABC transporter
Tax=CG_Delta_06
07V140M03_2016_Ig8141_scaffold_8170_22
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18616..19791
DNA (1176bp) protein (392aa)
Putative uncharacterized protein bin=GWC2_Nitrospirae_57_13 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
07V140M03_2016_Ig8141_scaffold_8170_23
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19899..21092
DNA (1194bp) protein (398aa)
Putative uncharacterized protein bin=GWB2_Nitrospirae_rel_47_37 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
Tax=CG_Delta_06
07V140M03_2016_Ig8141_scaffold_8170_24
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21608..23653
DNA (2046bp) protein (682aa)
TonB-dependent receptor Tax=delta proteobacterium NaphS2 RepID=D8EW95_9DELT
TonB-dependent receptor plug
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_8170_25
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23662..25656
DNA (1995bp) protein (665aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1Y8E5_9DELT
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_8170_26
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25653..26474
DNA (822bp) protein (274aa)
TonB family protein Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z3X7_DESAT
TonB family protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_8170_27
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26480..27841
DNA (1362bp) protein (454aa)
hydrogenobyrinic acid a,c-diamide synthase/cobyrinate a,c-diamide synthase (EC:6.3.5.9 6.3.5.-)
Cobyrinic acid A,C-diamide synthase Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RER5_DESPD
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_8170_28
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27838..28743
DNA (906bp) protein (302aa)
Periplasmic binding protein Tax=delta proteobacterium NaphS2 RepID=D8EW91_9DELT
ABC-type Fe(3+) transport system, periplasmic substrate binding component
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_8170_29
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28733..29743
DNA (1011bp) protein (337aa)
Transport system permease protein Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SL72_9DELT
transport system permease
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
07V140M03_2016_Ig8141_scaffold_8170_30
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29734..30531
DNA (798bp) protein (266aa)
ABC transporter related Tax=delta proteobacterium MLMS-1 RepID=Q1NTN4_9DELT
ABC transporter related protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Displaying items 1-30 of 135 in total

View Taxonomy