ggKbase home page

07V140M03_2016_Ig8141_scaffold_315

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07V140M03_2016_Ig8141_scaffold_315_1

Not on your lists

comp(2..112)
DNA (111bp) protein (37aa)
Sarcosine oxidase, alpha subunit Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CPZ2_DESK7
Marine sediment metagenome DNA, contig: S03H2_S17435 {ECO:0000313|EMBL:GAH72380.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sarcosine oxidase subunit alpha
07V140M03_2016_Ig8141_scaffold_315_2
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(354..629)
DNA (276bp) protein (92aa)
laccase Tax=Bacillus sp. m3-13 RepID=UPI0001E8953F
hypothetical protein
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_315_3

Not on your lists

comp(610..1131)
DNA (522bp) protein (174aa)
Uncharacterized conserved protein Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D154_PELTS
Marine sediment metagenome DNA, contig: S01H1_S34563 {ECO:0000313|EMBL:GAG31851.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
07V140M03_2016_Ig8141_scaffold_315_4

Not on your lists

comp(1510..2220)
DNA (711bp) protein (237aa)
Ribonucleoside-triphosphate reductase-like protein Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8Q3_9EURY
Marine sediment metagenome DNA, contig: S01H4_C03634 {ECO:0000313|EMBL:GAG59303.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ribonucleoside-triphosphate reductase-like protein
07V140M03_2016_Ig8141_scaffold_315_5

Not on your lists

comp(2217..2471)
DNA (255bp) protein (85aa)
Glutaredoxin 2 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RDZ1_ARCPA
Marine sediment metagenome DNA, contig: S12H4_C03043 {ECO:0000313|EMBL:GAI62736.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
glutaredoxin
07V140M03_2016_Ig8141_scaffold_315_6
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

comp(2489..4783)
DNA (2295bp) protein (765aa)
Anaerobic ribonucleoside-triphosphate reductase Tax=planctomycete KSU-1 RepID=I3IIX4_9PLAN
ribonucleoside-triphosphate reductase class III catalytic subunit
Tax=CG_Elusi_03
07V140M03_2016_Ig8141_scaffold_315_7
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(5046..5495)
DNA (450bp) protein (150aa)
Transcriptional repressor NrdR Tax=Peptostreptococcus RepID=D3MRX7_9FIRM
NrdR family transcriptional regulator
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_315_8

Not on your lists

comp(5970..6101)
DNA (132bp) protein (44aa)
Marine sediment metagenome DNA, contig: S01H1_S39005 {ECO:0000313|EMBL:GAG42890.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
07V140M03_2016_Ig8141_scaffold_315_9

Not on your lists

comp(6098..6967)
DNA (870bp) protein (290aa)
Cell division protein FtsZ Tax=Thermincola potens (strain JR) RepID=D5X993_THEPJ
Marine sediment metagenome DNA, contig: S01H4_C02591 {ECO:0000313|EMBL:GAG64570.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cell division protein FtsZ
07V140M03_2016_Ig8141_scaffold_315_10
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(7025..8212)
DNA (1188bp) protein (396aa)
Cell division protein ftsA Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LST0_DESBD
cell division protein FtsA
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_315_11

Not on your lists

comp(8249..8986)
DNA (738bp) protein (246aa)
Putative division protein, FtsQ-type Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AYH7_CLOA9
Marine sediment metagenome DNA, contig: S01H1_C00454 {ECO:0000313|EMBL:GAF77581.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
division protein, FtsQ-type
07V140M03_2016_Ig8141_scaffold_315_12
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(9180..10100)
DNA (921bp) protein (307aa)
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase Tax=Lachnospiraceae RepID=C9LAD8_BLAHA
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_315_13
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(10113..11501)
DNA (1389bp) protein (463aa)
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LF09_9BACT
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_315_14
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(11634..12743)
DNA (1110bp) protein (370aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase Tax=Clostridium thermocellum RepID=MURG_CLOTH
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_315_15

Not on your lists

comp(12755..13861)
DNA (1107bp) protein (369aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036CC2EE
Marine sediment metagenome DNA, contig: S01H1_C00018 {ECO:0000313|EMBL:GAF70286.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
stage V sporulation protein E
07V140M03_2016_Ig8141_scaffold_315_16
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(14356..15174)
DNA (819bp) protein (273aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003702D3C
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_315_17

Not on your lists

comp(15185..15346)
DNA (162bp) protein (54aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000380027D
Marine sediment metagenome DNA, contig: S06H3_S07748 {ECO:0000313|EMBL:GAI18972.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying 17 items

View Taxonomy