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07V140M03_2016_Ig8141_scaffold_1982

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07V140M03_2016_Ig8141_scaffold_1982_1

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comp(3..209)
DNA (207bp) protein (69aa)
ATPase component of various ABC-type transport systems with duplicated ATPase domain Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T6S5_9EURY
Marine sediment metagenome DNA, contig: S01H4_C00341 {ECO:0000313|EMBL:GAG70864.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
oligopeptide/dipeptide ABC transporter ATPase
07V140M03_2016_Ig8141_scaffold_1982_2

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comp(215..916)
DNA (702bp) protein (234aa)
ABC-type dipeptide/oligopeptide/nickel transport system ATPase component Tax=uncultured candidate division JS1 bacterium RepID=G3BMI5_9BACT
Marine sediment metagenome DNA, contig: S01H4_C00050 {ECO:0000313|EMBL:GAG62639.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
appD3; Oligopeptide transport ATP-binding protein AppD
07V140M03_2016_Ig8141_scaffold_1982_3

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comp(1000..1113)
DNA (114bp) protein (38aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003806ACC
Marine sediment metagenome DNA, contig: S01H4_C00341 {ECO:0000313|EMBL:GAG70866.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
dppD; peptide ABC transporter ATP-binding protein
07V140M03_2016_Ig8141_scaffold_1982_4

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comp(1256..2137)
DNA (882bp) protein (294aa)
hypothetical protein Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI000375120E
Marine sediment metagenome DNA, contig: S01H4_C00050 {ECO:0000313|EMBL:GAG62633.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative dipeptide ABC transporter permease
07V140M03_2016_Ig8141_scaffold_1982_5
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(2147..3121)
DNA (975bp) protein (325aa)
hypothetical protein Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI00037436F2
putative dipeptide ABC transporter permease
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_1982_6
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(3332..4966)
DNA (1635bp) protein (545aa)
hypothetical protein Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI00038231BD
putative dipeptide ABC transporter substrate-binding protein
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_1982_7

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comp(5102..5320)
DNA (219bp) protein (73aa)
peptidase M23 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B4107C
Marine sediment metagenome DNA, contig: S12H4_L03742 {ECO:0000313|EMBL:GAI83874.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
pdc2; peptidase M23
07V140M03_2016_Ig8141_scaffold_1982_8

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comp(5389..5892)
DNA (504bp) protein (168aa)
hypothetical protein Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00036EF5D8
Marine sediment metagenome DNA, contig: S01H4_C00748 {ECO:0000313|EMBL:GAG74560.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
peptidoglycan-binding protein
07V140M03_2016_Ig8141_scaffold_1982_9
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

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comp(6002..6433)
DNA (432bp) protein (144aa)
hypothetical protein Tax=Spirochaeta bajacaliforniensis RepID=UPI00036F8BF4
peptidase M23
Tax=RBG_13_Actinobacteria_35_12_curated
07V140M03_2016_Ig8141_scaffold_1982_10

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comp(6753..7085)
DNA (333bp) protein (111aa)
Uncharacterized protein Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RXV7_THEOJ
Marine sediment metagenome DNA, contig: S01H4_L07445 {ECO:0000313|EMBL:GAG89247.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
07V140M03_2016_Ig8141_scaffold_1982_11

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comp(7153..9339)
DNA (2187bp) protein (729aa)
Marine sediment metagenome DNA, contig: S01H4_C00244 {ECO:0000313|EMBL:GAG68591.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Lytic transglycosylase catalytic bin=GWE2_RBX1_39_32 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
lytic transglycosylase
07V140M03_2016_Ig8141_scaffold_1982_12
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

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comp(9348..10346)
DNA (999bp) protein (333aa)
Response regulator receiver modulated metal dependent phosphohydrolase Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LUI9_TEPAE
Response regulator receiver modulated metal dependent phosphohydrolase
Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
07V140M03_2016_Ig8141_scaffold_1982_13
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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comp(10357..10806)
DNA (450bp) protein (150aa)
Response regulator receiver protein bin=GWF2_Lentisphaerae_57_35 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
response regulator receiver protein
Tax=GWF2_Lentisphaerae_57_35_curated
07V140M03_2016_Ig8141_scaffold_1982_14

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comp(10819..11571)
DNA (753bp) protein (251aa)
Two-component sensor kinase Tax=planctomycete KSU-1 RepID=I3IR31_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KKM21112.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sensory box histidine kinase
07V140M03_2016_Ig8141_scaffold_1982_15
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11586..12674)
DNA (1089bp) protein (363aa)
sensor histidine kinase (EC:2.7.13.3)
Putative sensor histidine kinase {ECO:0000313|EMBL:CCK78174.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CCK78174.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" source="Desulfobacula toluolica (strain DSM 7467 / Tol2).;"
hypothetical protein Tax=Desulfobacter curvatus RepID=UPI0003789E46
07V140M03_2016_Ig8141_scaffold_1982_16
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12733..14124)
DNA (1392bp) protein (464aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YAR7_9DELT
Putative uncharacterized protein {ECO:0000313|EMBL:CBX27661.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
PAS/PAC sensor protein
07V140M03_2016_Ig8141_scaffold_1982_17

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comp(14197..14451)
DNA (255bp) protein (85aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036C607D
Marine sediment metagenome DNA, contig: S03H2_L01112 {ECO:0000313|EMBL:GAH45766.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ggdef domain protein
07V140M03_2016_Ig8141_scaffold_1982_18

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comp(14438..14758)
DNA (321bp) protein (107aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000365B6D0
Marine sediment metagenome DNA, contig: S06H3_L07877 {ECO:0000313|EMBL:GAI24499.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
diguanylate cyclase
07V140M03_2016_Ig8141_scaffold_1982_19

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comp(14770..15855)
DNA (1086bp) protein (362aa)
Multi-sensor signal transduction histidine kinase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RP22_ACCPU
Marine sediment metagenome DNA, contig: S01H4_C00555 {ECO:0000313|EMBL:GAG73484.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
multi-sensor signal transduction histidine kinase
Displaying 19 items

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