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07V140M03_2016_Ig8141_scaffold_2054

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07V140M03_2016_Ig8141_scaffold_2054_1
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

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2..844
DNA (843bp) protein (281aa)
hypothetical protein Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI0003696924
shikimate 5-dehydrogenase
Tax=RBG_13_Actinobacteria_35_12_curated
07V140M03_2016_Ig8141_scaffold_2054_2

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874..1902
DNA (1029bp) protein (343aa)
chorismate synthase (EC:4.2.3.5)
Chorismate synthase Tax=planctomycete KSU-1 RepID=I3IM43_9PLAN
Marine sediment metagenome DNA, contig: S01H1_L00401 {ECO:0000313|EMBL:GAF83051.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
07V140M03_2016_Ig8141_scaffold_2054_3
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

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1908..2420
DNA (513bp) protein (171aa)
hypothetical protein Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI00037F2E7B
AroK; shikimate kinase
Tax=RBG_13_Actinobacteria_35_12_curated
07V140M03_2016_Ig8141_scaffold_2054_4
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

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2431..3651
DNA (1221bp) protein (407aa)
hypothetical protein Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI00035E442F
3-dehydroquinate synthase
Tax=RBG_13_Actinobacteria_35_12_curated
07V140M03_2016_Ig8141_scaffold_2054_5

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3645..4100
DNA (456bp) protein (152aa)
aroQ; 3-dehydroquinate dehydratase (EC:4.2.1.10)
hypothetical protein Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI00036D32E6
Marine sediment metagenome DNA, contig: S06H3_C01479 {ECO:0000313|EMBL:GAH96692.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
07V140M03_2016_Ig8141_scaffold_2054_6
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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4255..5127
DNA (873bp) protein (291aa)
hypothetical protein Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI0003623150
prephenate dehydrogenase
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_2054_7

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5209..5688
DNA (480bp) protein (160aa)
single-stranded DNA-binding protein Tax=Desulfurispora thermophila RepID=UPI0003666737
Marine sediment metagenome DNA, contig: S03H2_S00893 {ECO:0000313|EMBL:GAH59087.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SsrA-binding protein
07V140M03_2016_Ig8141_scaffold_2054_8

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6125..6838
DNA (714bp) protein (238aa)
Marine sediment metagenome DNA, contig: S12H4_S10497 {ECO:0000313|EMBL:GAI97032.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
07V140M03_2016_Ig8141_scaffold_2054_9

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6914..7591
DNA (678bp) protein (226aa)
PEGA domain protein Tax=Methanoplanus limicola DSM 2279 RepID=H1Z3Y1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKN20031.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PEGA domain-containing protein
07V140M03_2016_Ig8141_scaffold_2054_10
Dictyoglomus turgidum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

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7634..9769
DNA (2136bp) protein (712aa)
Lipoprotein, putative Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YC13_DICT6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK42563.1}; Flags: Precursor;; species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus turgidum (strain Z-1310 / DSM 6724).;"
07V140M03_2016_Ig8141_scaffold_2054_11

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10139..11596
DNA (1458bp) protein (486aa)
PEGA domain protein Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RDD4_METP4
Marine sediment metagenome DNA, contig: S12H4_S10497 {ECO:0000313|EMBL:GAI97032.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PEGA domain-containing protein
07V140M03_2016_Ig8141_scaffold_2054_12
unknown

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11778..12845
DNA (1068bp) protein (356aa)

This feature has no annotations

07V140M03_2016_Ig8141_scaffold_2054_13
Mesotoga prima, Mesotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

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12903..13967
DNA (1065bp) protein (355aa)
Uncharacterized protein Tax=Mesotoga prima MesG1.Ag.4.2 RepID=I2F815_9THEM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK08068.1}; Flags: Precursor;; species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Mesotoga.;" source="Mesotoga prima MesG1.Ag.4.2.;"
07V140M03_2016_Ig8141_scaffold_2054_14
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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14167..15267
DNA (1101bp) protein (367aa)
Putative lipoprotein Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5Y6L2_TREAZ
putative lipoprotein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
07V140M03_2016_Ig8141_scaffold_2054_15
Smithella sp. SC_K08D17, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(15735..15872)
DNA (138bp) protein (46aa)
Endonuclease DDE {ECO:0000313|EMBL:KIE18309.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SC_K08D17.;"
rha:RHA1_ro10078 IS630 family transposase bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
Displaying 15 items

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