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07V140M03_2016_Ig8141_scaffold_3222

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_3222_trna_2
unknown

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comp(6111..6184)
DNA (74bp)
transferRNA Ala
07V140M03_2016_Ig8141_scaffold_3222_1
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

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comp(1..399)
DNA (399bp) protein (133aa)
hypothetical protein bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
major facilitator transporter
Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
2019_SCN_bioreactor_t3_biofilm_scaffold_3222_trna_1
unknown

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comp(6284..6357)
DNA (74bp)
transferRNA Ile
07V140M03_2016_Ig8141_scaffold_3222_2
unknown

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comp(420..707)
DNA (288bp) protein (96aa)

This feature has no annotations

2019_SCN_bioreactor_t3_biofilm_scaffold_3222_16S_1
unknown

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comp(6557..8068)
DNA (1512bp)
16S ribosomal RNA (16S rRNA)
07V140M03_2016_Ig8141_scaffold_3222_3
Paenibacillus sp. FSL H7-0357, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(700..1725)
DNA (1026bp) protein (342aa)
Radical SAM domain protein Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P9D2_METFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ21249.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0357.;"
07V140M03_2016_Ig8141_scaffold_3222_4
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1732..2823)
DNA (1092bp) protein (364aa)
Radical SAM domain protein Tax=Methanolinea tarda NOBI-1 RepID=G6FGI6_9EURY
radical SAM domain-containing protein
Tax=CG_Delta_05
07V140M03_2016_Ig8141_scaffold_3222_5

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comp(3243..3389)
DNA (147bp) protein (49aa)
Marine sediment metagenome DNA, contig: S03H2_S18461 {ECO:0000313|EMBL:GAH68896.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
07V140M03_2016_Ig8141_scaffold_3222_6

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3504..5093
DNA (1590bp) protein (530aa)
Uncharacterized protein Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CG69_KOSOT
Marine sediment metagenome DNA, contig: S01H4_S11645 {ECO:0000313|EMBL:GAH00957.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
07V140M03_2016_Ig8141_scaffold_3222_7

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5314..6387
DNA (1074bp) protein (358aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037D25F5
Marine sediment metagenome DNA, contig: S01H1_C00381 {ECO:0000313|EMBL:GAF76455.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GTP-binding protein YchF
07V140M03_2016_Ig8141_scaffold_3222_8

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6497..6913
DNA (417bp) protein (139aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000365BBCF
Marine sediment metagenome DNA, contig: S01H4_C00005 {ECO:0000313|EMBL:GAG60757.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rrf2 family protein
07V140M03_2016_Ig8141_scaffold_3222_9

Not on your lists

6965..7873
DNA (909bp) protein (303aa)
cysteine synthase Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036736A1
Marine sediment metagenome DNA, contig: S01H4_C01066 {ECO:0000313|EMBL:GAG61549.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
CysK; cysteine synthase
07V140M03_2016_Ig8141_scaffold_3222_10

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7964..8998
DNA (1035bp) protein (345aa)
Marine sediment metagenome DNA, contig: S01H4_C00707 {ECO:0000313|EMBL:GAG74417.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein; K07089 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
permease
07V140M03_2016_Ig8141_scaffold_3222_11

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9061..9207
DNA (147bp) protein (49aa)
EMAP domain protein Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8RDK8_THETN
Marine sediment metagenome DNA, contig: S01H1_S24836 {ECO:0000313|EMBL:GAG20917.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Arc1; EMAP domain-containing protein
07V140M03_2016_Ig8141_scaffold_3222_12

Not on your lists

9328..10092
DNA (765bp) protein (255aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000370750D
Marine sediment metagenome DNA, contig: S01H4_S06364 {ECO:0000313|EMBL:GAH00939.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
NAD-dependent deacetylase
07V140M03_2016_Ig8141_scaffold_3222_13

Not on your lists

10353..10613
DNA (261bp) protein (87aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037B849B
Marine sediment metagenome DNA, contig: S01H1_L01816 {ECO:0000313|EMBL:GAF84925.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RNA recognition motif-containing protein
07V140M03_2016_Ig8141_scaffold_3222_14

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10875..11429
DNA (555bp) protein (185aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036AC811
Marine sediment metagenome DNA, contig: S01H1_C00205 {ECO:0000313|EMBL:GAF73651.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
proton-coupled thiamine transporter YuaJ
07V140M03_2016_Ig8141_scaffold_3222_15

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11441..12115
DNA (675bp) protein (225aa)
thiamine pyrophosphokinase (EC:2.7.6.2)
Thiamine pyrophosphokinase Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CWU1_HALOH
Marine sediment metagenome DNA, contig: S12H4_C02664 {ECO:0000313|EMBL:GAI59292.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
07V140M03_2016_Ig8141_scaffold_3222_16

Not on your lists

12362..14458
DNA (2097bp) protein (699aa)
transketolase (EC:2.2.1.1)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000378E04A
Marine sediment metagenome DNA, contig: S03H2_C00311 {ECO:0000313|EMBL:GAH19436.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
07V140M03_2016_Ig8141_scaffold_3222_17

Not on your lists

14754..14900
DNA (147bp) protein (49aa)
Marine sediment metagenome DNA, contig: S12H4_S15039 {ECO:0000313|EMBL:GAJ09376.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
07V140M03_2016_Ig8141_scaffold_3222_18

Not on your lists

14884..15462
DNA (579bp) protein (193aa)
Marine sediment metagenome DNA, contig: S12H4_S02975 {ECO:0000313|EMBL:GAJ01404.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
07V140M03_2016_Ig8141_scaffold_3222_19
unknown

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15604..15705
DNA (102bp) protein (34aa)

This feature has no annotations

07V140M03_2016_Ig8141_scaffold_3222_20
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

15924..16052
DNA (129bp) protein (43aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036795FD
RNA recognition motif-containing protein
Tax=RBG_13_Actinobacteria_35_12_curated
07V140M03_2016_Ig8141_scaffold_3222_21
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(16100..17203)
DNA (1104bp) protein (368aa)
dhaT1; 1,3-propanediol dehydrogenase (EC:1.1.1.202)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00035EE9D4
Tax=RBG_19FT_COMBO_JS1_35_14_curated
Displaying 24 items

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