ggKbase home page

07V140M03_2016_Ig8141_scaffold_12077

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07V140M03_2016_Ig8141_scaffold_12077_1
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(3..1187)
DNA (1185bp) protein (395aa)
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QQ04_ACEAZ
Tax=CG_OP9-01
07V140M03_2016_Ig8141_scaffold_12077_2
CG_Omnitr_04, Omnitrophica, Bacteria

Not on your lists


comp(1731..5780)
DNA (4050bp) protein (1350aa)
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase, A subunit Tax=Oscillochloris trichoides DG-6 RepID=E1IGI9_9CHLR
Tax=CG_Omnitr_04
07V140M03_2016_Ig8141_scaffold_12077_3
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(5885..7834)
DNA (1950bp) protein (650aa)
DNA topoisomerase IV subunit B (EC:5.99.1.3)
DNA gyrase subunit B Tax=Thermincola potens (strain JR) RepID=D5X8C5_THEPJ
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_12077_4
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(8002..8319)
DNA (318bp) protein (106aa)
hypothetical protein
Putative uncharacterized protein bin=GWF2_Bacteroidetes_49_14 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_12077_5
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(8316..9455)
DNA (1140bp) protein (380aa)
DNA replication and repair protein RecF Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QSA0_ACEAZ
DNA replication and repair protein RecF
Tax=RBG_19FT_COMBO_JS1_35_14_curated
07V140M03_2016_Ig8141_scaffold_12077_6
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(9724..10890)
DNA (1167bp) protein (389aa)
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F4K2_DESDL
Tax=CG_OP9-01
07V140M03_2016_Ig8141_scaffold_12077_7
Halanaerobium praevalens, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11124..12485)
DNA (1362bp) protein (454aa)
Chromosomal replication initiator protein DnaA Tax=Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) RepID=E3DLI2_HALPG
chromosomal replication initiator protein DnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL).;"
07V140M03_2016_Ig8141_scaffold_12077_8

Not on your lists


13181..13321
DNA (141bp) protein (47aa)
50S ribosomal protein L34 Tax=Atopobium vaginae DSM 15829 RepID=F1T5R7_9ACTN
Marine sediment metagenome DNA, contig: S03H2_S18139 {ECO:0000313|EMBL:GAH65169.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
50S ribosomal protein L34
07V140M03_2016_Ig8141_scaffold_12077_9

Not on your lists

13348..13680
DNA (333bp) protein (111aa)
Ribonuclease P protein component Tax=Clostridium difficile P15 RepID=T4KRV4_CLODI
Marine sediment metagenome DNA, contig: S12H4_C02369 {ECO:0000313|EMBL:GAI70750.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ribonuclease P protein component
07V140M03_2016_Ig8141_scaffold_12077_10

Not on your lists

14107..14997
DNA (891bp) protein (297aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00035FC5B1
Marine sediment metagenome DNA, contig: S03H2_L05200 {ECO:0000313|EMBL:GAH46278.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
membrane protein insertase
07V140M03_2016_Ig8141_scaffold_12077_11

Not on your lists

15054..15572
DNA (519bp) protein (173aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000382E136
Marine sediment metagenome DNA, contig: S03H2_S02367 {ECO:0000313|EMBL:GAH60414.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
single-stranded nucleic acid binding R3H domain-containing protein
07V140M03_2016_Ig8141_scaffold_12077_12

Not on your lists

16171..17130
DNA (960bp) protein (320aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037C31E9
Marine sediment metagenome DNA, contig: S01H4_C00261 {ECO:0000313|EMBL:GAG69085.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
tRNA modification GTPase trmE
Displaying 12 items

View Taxonomy