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07M_4_2014_scaffold_150

Search features with annotation key words

Displaying items 1-30 of 46 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_150_1
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

2..226
DNA (225bp) protein (75aa)
ATP-dependent Clp protease ATP-binding subunit ClpX id=2786996 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
clpX; ATP-dependent protease Clp ATPase subunit
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
07M_4_2014_scaffold_150_2
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(346..1227)
DNA (882bp) protein (294aa)
Uncharacterized protein id=2786992 bin=GWF2_Melioribacter_38_21 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria rbh
hypothetical protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
07M_4_2014_scaffold_150_3
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

1271..2569
DNA (1299bp) protein (433aa)
Uncharacterized protein id=2786988 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria rbh
hypothetical protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
07M_4_2014_scaffold_150_4
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

2683..3345
DNA (663bp) protein (221aa)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase id=2786986 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria rbh
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
07M_4_2014_scaffold_150_5
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

3371..3619
DNA (249bp) protein (83aa)
Uncharacterized protein id=4927863 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
07M_4_2014_scaffold_150_6
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

3841..4455
DNA (615bp) protein (205aa)
id=4301356 bin=GWC2_Ignavibacteria_38_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria rbh
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
07M_4_2014_scaffold_150_7
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(4540..5418)
DNA (879bp) protein (293aa)
Uncharacterized protein id=4301351 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria rbh
hypothetical protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
07M_4_2014_scaffold_150_8
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(5415..6023)
DNA (609bp) protein (203aa)
Para-aminobenzoate synthase component I id=4301349 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria rbh
para-aminobenzoate synthase component I
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
07M_4_2014_scaffold_150_9
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(6007..6996)
DNA (990bp) protein (330aa)
Anthranilate/para-aminobenzoate synthase component I id=2787250 bin=GWF2_Melioribacter_38_21 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria rbh
TrpE protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
07M_4_2014_scaffold_150_10
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7015..8361)
DNA (1347bp) protein (449aa)
DNA repair protein radA id=2787240 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria rbh
DNA repair protein RadA
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
07M_4_2014_scaffold_150_11
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(8363..9181)
DNA (819bp) protein (273aa)
ABC transporter-like protein id=4301341 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria rbh
ABC transporter-like protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
07M_4_2014_scaffold_150_12
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(9224..10735)
DNA (1512bp) protein (504aa)
Cytochrome c family protein id=4301327 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria rbh
cytochrome c family protein rbh
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
07M_4_2014_scaffold_150_13
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(10945..12999)
DNA (2055bp) protein (685aa)
Dipeptidyl-peptidase III id=2786982 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria rbh
dipeptidyl-peptidase III
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
07M_4_2014_scaffold_150_14
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

13101..13418
DNA (318bp) protein (106aa)
Putative arsenate reductase-like protein id=4927861 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
arsenate reductase-like protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
07M_4_2014_scaffold_150_15
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(13471..14079)
DNA (609bp) protein (203aa)
HAD family hydrolase id=4927860 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria rbh
HAD family hydrolase
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
07M_4_2014_scaffold_150_16
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(14320..17454)
DNA (3135bp) protein (1045aa)
Acriflavin resistance protein id=2786976 bin=GWF2_Melioribacter_38_21 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria rbh
acriflavin resistance protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
07M_4_2014_scaffold_150_17
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(17469..18530)
DNA (1062bp) protein (354aa)
Efflux transporter, RND family, MFP subunit id=4406527 bin=GWC2_Ignavibacteria_38_9 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria rbh
RND family efflux transporter MFP subunit
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
07M_4_2014_scaffold_150_18
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(18557..19876)
DNA (1320bp) protein (440aa)
Outer membrane efflux protein id=4406529 bin=GWC2_Ignavibacteria_38_9 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria rbh
outer membrane efflux protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
07M_4_2014_scaffold_150_19
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(19873..20508)
DNA (636bp) protein (212aa)
Transcriptional regulator, TetR family id=4406531 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria rbh
transcriptional regulator, TetR family
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
07M_4_2014_scaffold_150_20
unknown

Not on your lists

comp(20793..20951)
DNA (159bp) protein (53aa)

This feature has no annotations

07M_4_2014_scaffold_150_21
unknown

Not on your lists

comp(21196..21438)
DNA (243bp) protein (81aa)

This feature has no annotations

07M_4_2014_scaffold_150_22
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

21457..21666
DNA (210bp) protein (70aa)
Putative uncharacterized protein id=4406534 bin=GWC2_Ignavibacteria_38_9 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
putative addiction module protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
07M_4_2014_scaffold_150_23
unknown

Not on your lists

21676..21864
DNA (189bp) protein (63aa)

This feature has no annotations

07M_4_2014_scaffold_150_24
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(22123..24186)
DNA (2064bp) protein (688aa)
Processing peptidase id=4406539 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria rbh
processing peptidase
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
07M_4_2014_scaffold_150_25
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(24247..25572)
DNA (1326bp) protein (442aa)
Processing peptidase id=2786958 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria rbh
processing peptidase
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
07M_4_2014_scaffold_150_26
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(25780..27552)
DNA (1773bp) protein (591aa)
Uncharacterized protein id=4435317 bin=GWF2_Melioribacter_38_21 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
Ig-like domain-containing protein
Tax=CG_Ignavi_02
07M_4_2014_scaffold_150_27
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(27715..28824)
DNA (1110bp) protein (370aa)
Regulatory helix-turn-helix protein, AraC family n=1 Tax=Polaribacter sp. MED152 RepID=A2TY41_9FLAO
regulatory helix-turn-helix protein, AraC family
Tax=CG_Ignavi_01
07M_4_2014_scaffold_150_28
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(29198..32017)
DNA (2820bp) protein (940aa)
Putative aminopeptidase id=2786792 bin=GWF2_Melioribacter_38_21 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria rbh
fibronectin type III domain-containing protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
07M_4_2014_scaffold_150_29
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(32461..33141)
DNA (681bp) protein (227aa)
Uncharacterized protein id=3924880 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
07M_4_2014_scaffold_150_30
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(33108..33701)
DNA (594bp) protein (198aa)
Uncharacterized protein id=3924881 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
Displaying items 1-30 of 46 in total

View Taxonomy