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07M_4_2014_scaffold_560

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_560_1
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(362..1900)
DNA (1539bp) protein (513aa)
Protein with oligosaccharyl transferase domain n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VK5_METBU
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
07M_4_2014_scaffold_560_2
R_RIF_OD1_06_34_9, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(1956..5201)
DNA (3246bp) protein (1082aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K1XD78_9BACT
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_34_9_curated
07M_4_2014_scaffold_560_3
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(5215..6645)
DNA (1431bp) protein (477aa)
Cobalamin B12-binding:Radical SAM id=1898960 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
radical SAM protein
Tax=RBG_13_Nitrospirae_41_22_curated
07M_4_2014_scaffold_560_4
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(6706..7425)
DNA (720bp) protein (240aa)
family 2 glycosyl transferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] id=7201316 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
family 2 glycosyl transferase
Tax=RIFOXYC12_FULL_TA06_54_24_curated
07M_4_2014_scaffold_560_5
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

comp(7422..8819)
DNA (1398bp) protein (466aa)
radical SAM protein id=7201317 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06 rbh
Fe-S oxidoreductase
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
07M_4_2014_scaffold_560_6
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(8823..9929)
DNA (1107bp) protein (369aa)
Similar to ADP-heptose-LPS-heptosyl transferase II n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q0R3_9BACT rbh
ADP-heptose-LPS-heptosyl transferase II {ECO:0000313|EMBL:GAN32538.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
glycosyl transferase
07M_4_2014_scaffold_560_7
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

comp(9931..11343)
DNA (1413bp) protein (471aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A7599
methyltransferase
Tax=RBG_13_OP3X_46_9_curated
07M_4_2014_scaffold_560_8
R_OP11_Gottesmanbacteria_39_11, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(11476..12207)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000378D27E
UbiE/COQ5-like methyltransferase
Tax=RIFCSPHIGHO2_02_FULL_OP11_Gottesmanbacteria_39_11_curated
07M_4_2014_scaffold_560_9
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(12220..13389)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6Q519_9ZZZZ
glycosyltransferase
Tax=RBG_13_Bathyarchaeota_38_9_curated
07M_4_2014_scaffold_560_10
GWA2_OP3X_41_15_curated, OP3X, Bacteria

Not on your lists

comp(13386..14441)
DNA (1056bp) protein (352aa)
Radical SAM additional 4Fe4S-binding domain-containing protein n=1 Tax=Bacillus cereus HuA2-1 RepID=J9B5Y8_BACCE
hypothetical protein
Tax=GWA2_OP3X_41_15_curated
07M_4_2014_scaffold_560_11
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(14413..15390)
DNA (978bp) protein (326aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AEF97183.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AEF97183.1};; TaxID=880724 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5).;"
UDP-glucose 4-epimerase n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BBH6_METIK
UDP-glucose 4-epimerase
07M_4_2014_scaffold_560_12
GWA2_OP3X_41_15_curated, OP3X, Bacteria

Not on your lists

comp(15394..16449)
DNA (1056bp) protein (352aa)
Molybdenum cofactor biosynthesis protein A id=4970936 bin=GWA2_Elusimicrobia_69_24 species=Helicobacter winghamensis genus=Helicobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
putative Fe-S oxidoreductase
Tax=GWA2_OP3X_41_15_curated
07M_4_2014_scaffold_560_13
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(16460..17707)
DNA (1248bp) protein (416aa)
Putative uncharacterized protein id=2188921 bin=GWB2_Proteobacteria_55_19 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good rbh
iron-sulfur binding protein rbh
Tax=RBG_13_Nitrospirae_41_22_curated
07M_4_2014_scaffold_560_14
R_OP11_Levybacteria_36_15, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(17701..19227)
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DUC7_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_36_15_curated
07M_4_2014_scaffold_560_15
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(19237..20520)
DNA (1284bp) protein (428aa)
Protein involved in methylthiolation of isopentenylated A37 derivatives in tRNA {ECO:0000313|EMBL:KHE90216.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
Radical SAM domain protein id=2867542 bin=GWF2_Planctomycete_41_51 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Fe-S oxidoreductase
07M_4_2014_scaffold_560_16
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(20513..21157)
DNA (645bp) protein (215aa)
hypothetical protein n=3 Tax=unclassified Crenarchaeota RepID=UPI00037DEE1C
acetyltransferase
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
07M_4_2014_scaffold_560_17
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(21158..22186)
DNA (1029bp) protein (343aa)
Putative dehydrogenase-like protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIC3_CHLTF rbh
putative dehydrogenase-like protein rbh
Tax=RBG_13_WOR_2_41_10_curated
07M_4_2014_scaffold_560_18
RIFOXYC1_FULL_OD1_Moranbacteria_44_13_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(22191..22358)
DNA (168bp) protein (56aa)
glycosyl transferase family 2 n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B4665B
glycosyltransferase
Tax=RIFOXYC1_FULL_OD1_Moranbacteria_44_13_curated
07M_4_2014_scaffold_560_19

Not on your lists

comp(22381..22635)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IKT8_9PLAN
Marine sediment metagenome DNA, contig: S03H2_S26809 {ECO:0000313|EMBL:GAH79270.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
07M_4_2014_scaffold_560_20
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(22945..23535)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI0003678164
glycosyltransferase
Tax=RBG_16_Archaea_50_20_curated
07M_4_2014_scaffold_560_21
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(23507..24136)
DNA (630bp) protein (210aa)
probable transcriptional regulator n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25B3
transcriptional regulator
Tax=RBG_16_Thaumarchaeota_49_8_curated
07M_4_2014_scaffold_560_22
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists

comp(24210..24503)
DNA (294bp) protein (98aa)
Glycosyl transferase family 2 id=4951035 bin=GWC2_Planctomycete_KSU_39_26 species=uncultured microorganism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
Tax=CG_Omnitr_01
07M_4_2014_scaffold_560_23
RIFOXYC2_FULL_RIF01_39_67_curated, RIF1, Bacteria

Not on your lists

comp(24840..25091)
DNA (252bp) protein (84aa)
glycosyl transferase family 2 n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B4665B
glycosyltransferase
Tax=RIFOXYC2_FULL_RIF01_39_67_curated
07M_4_2014_scaffold_560_24
RIFOXYC2_FULL_WOR_2_45_15_curated, WOR-2, Bacteria

Not on your lists

comp(25063..26571)
DNA (1509bp) protein (503aa)
Radical SAM domain protein id=4039676 bin=GWF2_OP3_43_52 species=unknown genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8 rbh
Fe-S-oxidoreductase
Tax=RIFOXYC2_FULL_WOR_2_45_15_curated
07M_4_2014_scaffold_560_25
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

comp(26578..27534)
DNA (957bp) protein (319aa)
Glycosyltransferase id=4326398 bin=GWC2_OP3_44_8 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52 rbh
glycosyl transferase
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
07M_4_2014_scaffold_560_26
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(27491..28261)
DNA (771bp) protein (257aa)
Glycosyl transferase, family 2 id=4039668 bin=GWF2_OP3_43_52 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8 rbh
glycosyl transferase, family 2
Tax=RBG_13_WOR_2_41_10_curated
07M_4_2014_scaffold_560_27
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists

comp(28266..28733)
DNA (468bp) protein (156aa)
sugar isomerase n=1 Tax=Flavobacteriaceae bacterium HQM9 RepID=UPI000248E8EE
polysaccharide biosynthesis protein
Tax=CG_Omnitr_01
Displaying 27 items

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