ggKbase home page

07M_4_2014_scaffold_1790

Search features with annotation key words

Displaying 11 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_1790_1
R_WOR_2_41_12, WOR-2, Bacteria

Not on your lists

111..389
DNA (279bp) protein (93aa)
Preprotein translocase, YajC subunit id=2273663 bin=GWB2_CP_45_9 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
preprotein translocase subunit YajC
Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
07M_4_2014_scaffold_1790_2
R_WOR_2_41_12, WOR-2, Bacteria

Not on your lists

404..2602
DNA (2199bp) protein (733aa)
Protein-export membrane protein SecD id=2273664 bin=GWB2_CP_45_9 species=uncultured bacterium W4-21b genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
protein-export membrane protein SecD
Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
07M_4_2014_scaffold_1790_3
RBG_13_WOR-2_44_8b_curated, WOR-2, Bacteria

Not on your lists

2609..4501
DNA (1893bp) protein (631aa)
Transcription-repair coupling factor id=4039550 bin=GWF2_OP3_43_52 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
transcription-repair coupling factor
Tax=RBG_13_WOR-2_44_8b_curated
07M_4_2014_scaffold_1790_4
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

4511..5404
DNA (894bp) protein (298aa)
Parvulin-like peptidyl-prolyl isomerase id=4039551 bin=GWF2_OP3_43_52 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
SurA domain-containing protein
Tax=RBG_13_WOR_2_41_10_curated
07M_4_2014_scaffold_1790_5
R_WOR_2_41_12, WOR-2, Bacteria

Not on your lists

5424..6350
DNA (927bp) protein (309aa)
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase id=4039552 bin=GWF2_OP3_43_52 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
07M_4_2014_scaffold_1790_6
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

Not on your lists


6323..7108
DNA (786bp) protein (262aa)
Ribosomal RNA small subunit methyltransferase A (EC:2.1.1.181)
Ribosomal RNA small subunit methyltransferase A id=4039553 bin=GWF2_OP3_43_52 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Tax=RBG_13_WOR_2_44_8_curated
07M_4_2014_scaffold_1790_7
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

7260..8174
DNA (915bp) protein (305aa)
ATPase, putative id=4237387 bin=GWF2_OP3_43_52 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
ATPase AAA
Tax=GWF2_WOR_2_43_52_curated
07M_4_2014_scaffold_1790_8
R_WOR_2_41_12, WOR-2, Bacteria

Not on your lists

8174..9247
DNA (1074bp) protein (358aa)
HD-GYP domain protein n=1 Tax=Paenibacillus sp. Aloe-11 RepID=H6CHQ6_9BACL
HD-GYP domain-containing protein
Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
07M_4_2014_scaffold_1790_9
Entamoeba invadens, Entamoeba, Eukaryota

Not on your lists

9234..10607
DNA (1374bp) protein (458aa)
myosin-2 heavy chain, non muscle, putative n=1 Tax=Entamoeba invadens IP1 RepID=UPI0002C3D053
Myosin-2 heavy chain, non muscle, putative {ECO:0000313|EMBL:ELP90006.1}; TaxID=370355 species="Eukaryota; Amoebozoa; Archamoebae; Entamoebidae; Entamoeba.;" source="Entamoeba invadens IP1.;"
NAD-dependent DNA ligase
07M_4_2014_scaffold_1790_10
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

10609..11511
DNA (903bp) protein (301aa)
Polysaccharide export protein id=4237419 bin=GWF2_OP3_43_52 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
polysaccharide export protein
Tax=GWF2_WOR_2_43_52_curated
07M_4_2014_scaffold_1790_11
R_OP3X_45_10, OP3X, Bacteria

Not on your lists

11523..11804
DNA (282bp) protein (94aa)
Putative uncharacterized protein id=3774694 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
Displaying 11 items

View Taxonomy